RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 SLC35F4A4IF30 521 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 FAM181BA6NEQ2 426 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 PPP1R12BO60237 982 aaPredicted RBP6.12□□□□□ -1.43
CPSF2-204ENST00000555244 LORP23490 312 aaPredicted RBP6.12□□□□□ -1.43
CPSF2-204ENST00000555244 CLTCL1P53675 1640 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
CPSF2-204ENST00000555244 SLC27A3Q5K4L6 730 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 NEXMIFQ5QGS0 1516 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 TMEM214Q6NUQ4 689 aaKnown RBP6.12□□□□□ -1.43
CPSF2-204ENST00000555244 SPATA31E1Q6ZUB1 1445 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 TAS1R3Q7RTX0 852 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 PRICKLE2Q7Z3G6 844 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 SLC9A9Q8IVB4 645 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 STAG2Q8N3U4 1231 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 CNTNAP3BQ96NU0 1288 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 CNTNAP3Q9BZ76 1288 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 HRH3Q9Y5N1 445 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 IVNS1ABPQ9Y6Y0 642 aa6.12□□□□□ -1.43
CPSF2-204ENST00000555244 NRXN3Q9Y4C0 1643 aa6.11□□□□□ -1.43
CPSF2-204ENST00000555244 PTPRUQ92729 1446 aa6.11□□□□□ -1.43
CPSF2-204ENST00000555244 RHOQP17081 205 aa6.11□□□□□ -1.43
CPSF2-204ENST00000555244 RNF144AP50876 292 aaPredicted RBP6.11□□□□□ -1.43
CPSF2-204ENST00000555244 FOXK2Q01167 660 aa6.11□□□□□ -1.43
CPSF2-204ENST00000555244 GNASQ5JWF2 1037 aa6.11□□□□□ -1.43
CPSF2-204ENST00000555244 VWA5B2Q8N398 1253 aa6.11□□□□□ -1.43
CPSF2-204ENST00000555244 COL26A1Q96A83 441 aa6.11□□□□□ -1.43
CPSF2-204ENST00000555244 NIFKQ9BYG3 293 aaKnown RBP6.11□□□□□ -1.43
CPSF2-204ENST00000555244 GZF1Q9H116 711 aaPredicted RBP6.11□□□□□ -1.43
CPSF2-204ENST00000555244 ITGA6P23229 1130 aa6.1□□□□□ -1.43
CPSF2-204ENST00000555244 HSPA1LP34931 641 aa6.1□□□□□ -1.43
CPSF2-204ENST00000555244 FKBP5Q13451 457 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-204ENST00000555244 LYSMD3Q7Z3D4 306 aa6.1□□□□□ -1.43
CPSF2-204ENST00000555244 COL25A1Q9BXS0 654 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-204ENST00000555244 FHDC1Q9C0D6 1143 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-204ENST00000555244 C19orf44Q9H6X5 657 aa6.1□□□□□ -1.43
CPSF2-204ENST00000555244 CABP1Q9NZU7 370 aa6.1□□□□□ -1.43
CPSF2-204ENST00000555244 AMOTL2Q9Y2J4 779 aa6.1□□□□□ -1.43
CPSF2-204ENST00000555244 DCCP43146 1447 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 METP08581 1390 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 ANKRD30BQ9BXX2 1392 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 RAB3GAP2Q9H2M9 1393 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 KIF1BO60333 1816 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 SENP3-EIF4A1A0A087X0R7 540 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 SERTM1A2A2V5 107 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 C21orf2O43822 256 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 KRT76Q01546 638 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 TEAD4Q15561 434 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 RHBDD1Q8TEB9 315 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 MKNK1Q9BUB5 465 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 C2orf49Q9BVC5 232 aaPredicted RBP6.09□□□□□ -1.43
CPSF2-204ENST00000555244 GRIP2Q9C0E4 1043 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 ZNF232Q9UNY5 417 aa6.09□□□□□ -1.43
CPSF2-204ENST00000555244 IQSEC3Q9UPP2 1182 aaPredicted RBP6.09□□□□□ -1.43
CPSF2-204ENST00000555244 CCDC144AA2RUR9 1427 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 XRN1Q8IZH2 1706 aaKnown RBP6.08□□□□□ -1.44
CPSF2-204ENST00000555244 MSH6P52701 1360 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 ABL1P00519 1130 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 NOS2P35228 1153 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 ZNF326Q5BKZ1 582 aaKnown RBP6.08□□□□□ -1.44
CPSF2-204ENST00000555244 TBCELQ5QJ74 424 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 TMCO4Q5TGY1 634 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 SV2AQ7L0J3 742 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
CPSF2-204ENST00000555244 NRXN1Q9ULB1 1477 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 SETD1AO15047 1707 aaKnown RBP6.08□□□□□ -1.44
CPSF2-204ENST00000555244 PTCH1Q13635 1447 aa6.08□□□□□ -1.44
CPSF2-204ENST00000555244 HIRAP54198 1017 aaPredicted RBP6.07□□□□□ -1.44
CPSF2-204ENST00000555244 PIP4K2BP78356 416 aa6.07□□□□□ -1.44
CPSF2-204ENST00000555244 RNFT1Q5M7Z0 435 aa6.07□□□□□ -1.44
CPSF2-204ENST00000555244 NANOS1Q8WY41 292 aaKnown RBP6.07□□□□□ -1.44
CPSF2-204ENST00000555244 EGFL7Q9UHF1 273 aa6.07□□□□□ -1.44
CPSF2-204ENST00000555244 TECPR2O15040 1411 aa6.07□□□□□ -1.44
CPSF2-204ENST00000555244 ABCC11Q96J66 1382 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 PPLO60437 1756 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 ADGRF5Q8IZF2 1346 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 SERPINB4P48594 390 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 POU4F2Q12837 409 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 SF3B2Q13435 895 aaKnown RBP6.06□□□□□ -1.44
CPSF2-204ENST00000555244 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 RIPOR1Q6ZS17 1223 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 SND1Q7KZF4 910 aaKnown RBP eCLIP6.06□□□□□ -1.44
CPSF2-204ENST00000555244 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
CPSF2-204ENST00000555244 L3MBTL2Q969R5 705 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 GAS2L1Q99501 681 aaPredicted RBP6.06□□□□□ -1.44
CPSF2-204ENST00000555244 C14orf93Q9H972 538 aaKnown RBP6.06□□□□□ -1.44
CPSF2-204ENST00000555244 USP3Q9Y6I4 520 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 PIK3C2GO75747 1445 aa6.06□□□□□ -1.44
CPSF2-204ENST00000555244 MYOM2P54296 1465 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 SPATA31C2B4DYI2 1134 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 EML1O00423 815 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 SCNN1AP37088 669 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 NAA30Q147X3 362 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-204ENST00000555244 WDR44Q5JSH3 913 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 C16orf46Q6P387 395 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 POTEAQ6S8J7 498 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 GLYCTKQ8IVS8 523 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 CUEDC1Q9NWM3 386 aaPredicted RBP6.05□□□□□ -1.44
CPSF2-204ENST00000555244 SEPT3Q9UH03 358 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 ADGRL3Q9HAR2 1447 aa6.05□□□□□ -1.44
CPSF2-204ENST00000555244 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms