RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TOM1L2Q6ZVM7 507 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-229ENST00000554672 WHAMMQ8TF30 809 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 TBC1D2BQ9UPU7 963 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 PCDHB11Q9Y5F2 797 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 POLR3AO14802 1390 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-229ENST00000554672 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
ATXN3-229ENST00000554672 USP19O94966 1318 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 EXOC5O00471 708 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 IRF5Q13568 498 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 TSGA10IPQ3SY00 556 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 CCDC85AQ96PX6 553 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-229ENST00000554672 CEP126Q9P2H0 1117 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 TULP4Q9NRJ4 1543 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 ATP7BP35670 1465 aa7.04□□□□□ -1.28
ATXN3-229ENST00000554672 BCL9O00512 1426 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 CRB1P82279 1406 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 ZBTB7CA1YPR0 619 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 SLURP2P0DP57 97 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 GPC1P35052 558 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 CLN3Q13286 438 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 GAS6Q14393 721 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 ZNF385CQ66K41 422 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-229ENST00000554672 GRIP2Q9C0E4 1043 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 AATKQ6ZMQ8 1374 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 ALS2Q96Q42 1657 aa7.03□□□□□ -1.28
ATXN3-229ENST00000554672 ABCA3Q99758 1704 aa7.02□□□□□ -1.29
ATXN3-229ENST00000554672 TRPM3Q9HCF6 1732 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-229ENST00000554672 POU4F2Q12837 409 aa7.02□□□□□ -1.29
ATXN3-229ENST00000554672 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
ATXN3-229ENST00000554672 ADAMTS8Q9UP79 889 aa7.02□□□□□ -1.29
ATXN3-229ENST00000554672 ZNF330Q9Y3S2 320 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-229ENST00000554672 BRD4O60885 1362 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-229ENST00000554672 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 RGPD8O14715 1765 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-229ENST00000554672 RREB1Q92766 1687 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 COL5A2P05997 1499 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-229ENST00000554672 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 CSB-PGBD3P0DP91 1061 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 POLD1P28340 1107 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 DBN1Q16643 649 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 CYP2U1Q7Z449 544 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 PHTF2Q8N3S3 785 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 ZNF837Q96EG3 531 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-229ENST00000554672 ARHGEF10LQ9HCE6 1279 aa7.01□□□□□ -1.29
ATXN3-229ENST00000554672 ADGRB1O14514 1584 aa7□□□□□ -1.29
ATXN3-229ENST00000554672 ARHGEF15O94989 841 aa7□□□□□ -1.29
ATXN3-229ENST00000554672 SRPK2P78362 688 aaKnown RBP7□□□□□ -1.29
ATXN3-229ENST00000554672 KCNMA1Q12791 1236 aa7□□□□□ -1.29
ATXN3-229ENST00000554672 ZNF592Q92610 1267 aa7□□□□□ -1.29
ATXN3-229ENST00000554672 RAB6BQ9NRW1 208 aa7□□□□□ -1.29
ATXN3-229ENST00000554672 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
ATXN3-229ENST00000554672 IFT172Q9UG01 1749 aa7□□□□□ -1.29
ATXN3-229ENST00000554672 NRKQ7Z2Y5 1582 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 SPATA31C2B4DYI2 1134 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 APBB1O00213 710 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 IL2RAP01589 272 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
ATXN3-229ENST00000554672 ARHGEF25Q86VW2 580 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 TRIM22Q8IYM9 498 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 NBPF15Q8N660 670 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 KCNH5Q8NCM2 988 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 NLRP3Q96P20 1036 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 CABP1Q9NZU7 370 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 DYRK1BQ9Y463 629 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 HRH3Q9Y5N1 445 aa6.99□□□□□ -1.29
ATXN3-229ENST00000554672 GPR25O00155 361 aa6.98□□□□□ -1.29
ATXN3-229ENST00000554672 PRKCSHP14314 528 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-229ENST00000554672 SLC27A3Q5K4L6 730 aa6.98□□□□□ -1.29
ATXN3-229ENST00000554672 ACSBG1Q96GR2 724 aa6.98□□□□□ -1.29
ATXN3-229ENST00000554672 STAU1O95793 577 aaKnown RBP6.97□□□□□ -1.29
ATXN3-229ENST00000554672 GNRH1P01148 92 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 HSPA6P17066 643 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 CENPCQ03188 943 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 ZNF827Q17R98 1081 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 WDR44Q5JSH3 913 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 RIPOR1Q6ZS17 1223 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 CNKSR1Q969H4 720 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 XAGE2Q96GT9 111 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 ESYT1Q9BSJ8 1104 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 GDPD2Q9HCC8 539 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
ATXN3-229ENST00000554672 CCDC7Q96M83 1385 aa6.96□□□□□ -1.29
ATXN3-229ENST00000554672 THBS1P07996 1170 aa6.96□□□□□ -1.3
ATXN3-229ENST00000554672 SRSF11Q05519 484 aaKnown RBP6.96□□□□□ -1.3
ATXN3-229ENST00000554672 VAC14Q08AM6 782 aa6.96□□□□□ -1.3
ATXN3-229ENST00000554672 SVOPQ8N4V2 548 aa6.96□□□□□ -1.3
ATXN3-229ENST00000554672 GMCL1Q96IK5 515 aa6.96□□□□□ -1.3
ATXN3-229ENST00000554672 GAS2L1Q99501 681 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-229ENST00000554672 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.3
ATXN3-229ENST00000554672 UTRNP46939 3433 aa6.96□□□□□ -1.3
ATXN3-229ENST00000554672 CRYBG1Q9Y4K1 1723 aa6.96□□□□□ -1.3
ATXN3-229ENST00000554672 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
ATXN3-229ENST00000554672 USP6P35125 1406 aa6.95□□□□□ -1.3
ATXN3-229ENST00000554672 PPIP5K1Q6PFW1 1433 aa6.95□□□□□ -1.3
ATXN3-229ENST00000554672 IL2RBP14784 551 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms