RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ROCK2O75116 1388 aaKnown RBP11.66□□□□□ -0.54
PRIM1-208ENST00000552590 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
PRIM1-208ENST00000552590 ZNF157P51786 506 aaPredicted RBP11.66□□□□□ -0.54
PRIM1-208ENST00000552590 CNBD1Q8NA66 436 aa11.66□□□□□ -0.54
PRIM1-208ENST00000552590 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
PRIM1-208ENST00000552590 KIF24Q5T7B8 1368 aa11.65□□□□□ -0.54
PRIM1-208ENST00000552590 H0YGN5 161 aa11.65□□□□□ -0.54
PRIM1-208ENST00000552590 PPM1GO15355 546 aaPredicted RBP11.65□□□□□ -0.54
PRIM1-208ENST00000552590 COL25A1Q9BXS0 654 aaPredicted RBP11.65□□□□□ -0.54
PRIM1-208ENST00000552590 PGAP2Q9UHJ9 254 aa11.65□□□□□ -0.54
PRIM1-208ENST00000552590 PAPPA2Q9BXP8 1791 aa11.65□□□□□ -0.54
PRIM1-208ENST00000552590 TBC1D8O95759 1140 aa11.64□□□□□ -0.55
PRIM1-208ENST00000552590 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
PRIM1-208ENST00000552590 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
PRIM1-208ENST00000552590 ST5P78524 1137 aa11.64□□□□□ -0.55
PRIM1-208ENST00000552590 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
PRIM1-208ENST00000552590 CDC37L1Q7L3B6 337 aa11.64□□□□□ -0.55
PRIM1-208ENST00000552590 GPRC5DQ9NZD1 345 aa11.64□□□□□ -0.55
PRIM1-208ENST00000552590 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
PRIM1-208ENST00000552590 USP48Q86UV5 1035 aa11.63□□□□□ -0.55
PRIM1-208ENST00000552590 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.63□□□□□ -0.55
PRIM1-208ENST00000552590 TTC28Q96AY4 2481 aa11.63□□□□□ -0.55
PRIM1-208ENST00000552590 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
PRIM1-208ENST00000552590 NPR1P16066 1061 aa11.63□□□□□ -0.55
PRIM1-208ENST00000552590 MTHFSP49914 203 aa11.63□□□□□ -0.55
PRIM1-208ENST00000552590 HIRAP54198 1017 aaPredicted RBP11.63□□□□□ -0.55
PRIM1-208ENST00000552590 ZNF530Q6P9A1 599 aaPredicted RBP11.63□□□□□ -0.55
PRIM1-208ENST00000552590 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
PRIM1-208ENST00000552590 SLC10A3P09131 477 aa11.62□□□□□ -0.55
PRIM1-208ENST00000552590 PPP4CP60510 307 aa11.62□□□□□ -0.55
PRIM1-208ENST00000552590 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
PRIM1-208ENST00000552590 PSMD1Q99460 953 aa11.62□□□□□ -0.55
PRIM1-208ENST00000552590 GBA2Q9HCG7 927 aaPredicted RBP11.62□□□□□ -0.55
PRIM1-208ENST00000552590 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
PRIM1-208ENST00000552590 C2orf69Q8N8R5 385 aa11.61□□□□□ -0.55
PRIM1-208ENST00000552590 SETDB2Q96T68 719 aa11.61□□□□□ -0.55
PRIM1-208ENST00000552590 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
PRIM1-208ENST00000552590 POLR2AP24928 1970 aaKnown RBP11.6□□□□□ -0.55
PRIM1-208ENST00000552590 EIF5P55010 431 aaKnown RBP11.6□□□□□ -0.55
PRIM1-208ENST00000552590 INTS3Q68E01 1043 aaKnown RBP11.6□□□□□ -0.55
PRIM1-208ENST00000552590 TRPM4Q8TD43 1214 aa11.6□□□□□ -0.55
PRIM1-208ENST00000552590 ZC3H15Q8WU90 426 aaKnown RBP11.6□□□□□ -0.55
PRIM1-208ENST00000552590 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
PRIM1-208ENST00000552590 SNED1Q8TER0 1413 aa11.59□□□□□ -0.55
PRIM1-208ENST00000552590 RBBP6Q7Z6E9 1792 aaKnown RBP11.59□□□□□ -0.55
PRIM1-208ENST00000552590 GPR25O00155 361 aa11.59□□□□□ -0.55
PRIM1-208ENST00000552590 PDE4AP27815 886 aa11.59□□□□□ -0.55
PRIM1-208ENST00000552590 GMPSP49915 693 aaPredicted RBP11.59□□□□□ -0.55
PRIM1-208ENST00000552590 PLEKHO1Q53GL0 409 aaPredicted RBP11.59□□□□□ -0.55
PRIM1-208ENST00000552590 MPNDQ8N594 471 aa11.59□□□□□ -0.55
PRIM1-208ENST00000552590 L3MBTL2Q969R5 705 aa11.59□□□□□ -0.55
PRIM1-208ENST00000552590 MTRQ99707 1265 aa11.59□□□□□ -0.55
PRIM1-208ENST00000552590 ANKRD26Q9UPS8 1709 aa11.58□□□□□ -0.56
PRIM1-208ENST00000552590 A0A087WZG4 1122 aa11.58□□□□□ -0.56
PRIM1-208ENST00000552590 SLC39A6Q13433 755 aa11.58□□□□□ -0.56
PRIM1-208ENST00000552590 ZNF330Q9Y3S2 320 aaPredicted RBP11.58□□□□□ -0.56
PRIM1-208ENST00000552590 WASHC2AQ641Q2 1341 aa11.58□□□□□ -0.56
PRIM1-208ENST00000552590 NIM1KQ8IY84 436 aa11.57□□□□□ -0.56
PRIM1-208ENST00000552590 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
PRIM1-208ENST00000552590 SCN7AQ01118 1682 aa11.57□□□□□ -0.56
PRIM1-208ENST00000552590 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
PRIM1-208ENST00000552590 TREML4Q6UXN2 200 aa11.57□□□□□ -0.56
PRIM1-208ENST00000552590 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 SHTN1A0MZ66 631 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 FKTNO75072 461 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 CXCL9Q07325 125 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 C1orf141Q5JVX7 400 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 C6orf132Q5T0Z8 1188 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 NBPF5PQ86XG9 351 aaPredicted RBP11.56□□□□□ -0.56
PRIM1-208ENST00000552590 RASAL3Q86YV0 1011 aa11.56□□□□□ -0.56
PRIM1-208ENST00000552590 MUC3AQ02505 3323 aa11.55□□□□□ -0.56
PRIM1-208ENST00000552590 ADM5C9JUS6 153 aa11.55□□□□□ -0.56
PRIM1-208ENST00000552590 SOX1O00570 391 aaPredicted RBP11.55□□□□□ -0.56
PRIM1-208ENST00000552590 ALDH1B1P30837 517 aa11.55□□□□□ -0.56
PRIM1-208ENST00000552590 EIF4A2Q14240 407 aaKnown RBP11.55□□□□□ -0.56
PRIM1-208ENST00000552590 LCE2AQ5TA79 106 aaPredicted RBP11.55□□□□□ -0.56
PRIM1-208ENST00000552590 KRT26Q7Z3Y9 468 aa11.55□□□□□ -0.56
PRIM1-208ENST00000552590 R3HDMLQ9H3Y0 253 aa11.55□□□□□ -0.56
PRIM1-208ENST00000552590 PRDM6Q9NQX0 595 aa11.55□□□□□ -0.56
PRIM1-208ENST00000552590 AMOTQ4VCS5 1084 aa11.54□□□□□ -0.56
PRIM1-208ENST00000552590 NOM1Q5C9Z4 860 aaKnown RBP11.54□□□□□ -0.56
PRIM1-208ENST00000552590 BCL2L13Q9BXK5 485 aa11.54□□□□□ -0.56
PRIM1-208ENST00000552590 TRIM17Q9Y577 477 aa11.54□□□□□ -0.56
PRIM1-208ENST00000552590 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
PRIM1-208ENST00000552590 PPIP5K2O43314 1243 aa11.53□□□□□ -0.56
PRIM1-208ENST00000552590 CAMTA2O94983 1202 aa11.53□□□□□ -0.56
PRIM1-208ENST00000552590 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
PRIM1-208ENST00000552590 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
PRIM1-208ENST00000552590 STARD3NLO95772 234 aa11.52□□□□□ -0.56
PRIM1-208ENST00000552590 AOC3Q16853 763 aa11.52□□□□□ -0.56
PRIM1-208ENST00000552590 SLC52A2Q9HAB3 445 aa11.52□□□□□ -0.56
PRIM1-208ENST00000552590 CNOT7Q9UIV1 285 aaKnown RBP11.52□□□□□ -0.56
PRIM1-208ENST00000552590 PKDCCQ504Y2 493 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 CC2D2BQ6DHV5 1058 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 OTOP1Q7RTM1 612 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 CARD11Q9BXL7 1154 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 PRO3102Q9H379 93 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms