RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TTC14Q96N46 770 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 NASPP49321 788 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-209ENST00000547018 NLRP10Q86W26 655 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 TOMM22Q9NS69 142 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 WDR33Q9C0J8 1336 aaKnown RBP15.15■□□□□ 0.02
SCAF11-209ENST00000547018 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-209ENST00000547018 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-209ENST00000547018 PSMA5P28066 241 aa15.15■□□□□ 0.02
SCAF11-209ENST00000547018 CUL4AQ13619 759 aa15.15■□□□□ 0.02
SCAF11-209ENST00000547018 ATP2B3Q16720 1220 aa15.15■□□□□ 0.02
SCAF11-209ENST00000547018 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-209ENST00000547018 KBTBD3Q8NAB2 608 aa15.15■□□□□ 0.02
SCAF11-209ENST00000547018 NEK1Q96PY6 1258 aa15.15■□□□□ 0.02
SCAF11-209ENST00000547018 GIGYF2Q6Y7W6 1299 aaKnown RBP15.14■□□□□ 0.01
SCAF11-209ENST00000547018 HAUS7Q99871 368 aa15.14■□□□□ 0.01
SCAF11-209ENST00000547018 NIP7Q9Y221 180 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCAF11-209ENST00000547018 MAP3K15Q6ZN16 1313 aa15.14■□□□□ 0.01
SCAF11-209ENST00000547018 ANKRD18BA2A2Z9 1011 aa15.14■□□□□ 0.01
SCAF11-209ENST00000547018 APOBRQ0VD83 1088 aa15.14■□□□□ 0.01
SCAF11-209ENST00000547018 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
SCAF11-209ENST00000547018 PHRF1Q9P1Y6 1649 aaKnown RBP15.14■□□□□ 0.01
SCAF11-209ENST00000547018 USP42Q9H9J4 1324 aaKnown RBP15.14■□□□□ 0.01
SCAF11-209ENST00000547018 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
SCAF11-209ENST00000547018 ZSWIM6Q9HCJ5 1215 aa15.14■□□□□ 0.01
SCAF11-209ENST00000547018 JAG2Q9Y219 1238 aa15.14■□□□□ 0.01
SCAF11-209ENST00000547018 WTIPA6NIX2 430 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-209ENST00000547018 ISCA1Q9BUE6 129 aa15.13■□□□□ 0.01
SCAF11-209ENST00000547018 SCN11AQ9UI33 1791 aa15.13■□□□□ 0.01
SCAF11-209ENST00000547018 ZSCAN22P10073 491 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-209ENST00000547018 CRKLP46109 303 aaKnown RBP15.13■□□□□ 0.01
SCAF11-209ENST00000547018 ZBTB38Q8NAP3 1195 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-209ENST00000547018 TTLL11Q8NHH1 800 aa15.13■□□□□ 0.01
SCAF11-209ENST00000547018 COL15A1P39059 1388 aa15.13■□□□□ 0.01
SCAF11-209ENST00000547018 USP54Q70EL1 1684 aa15.13■□□□□ 0.01
SCAF11-209ENST00000547018 H3BQV1 296 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 OSBP2Q969R2 916 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 TEX13AQ9BXU3 409 aaPredicted RBP15.12■□□□□ 0.01
SCAF11-209ENST00000547018 ZNF609O15014 1411 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 FSD2A1L4K1 749 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 M0R2C6 588 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 RXRAP19793 462 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 CAMK4Q16566 473 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 CDC37L1Q7L3B6 337 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 FAM184AQ8NB25 1140 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 COL18A1P39060 1754 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 PHKA1P46020 1223 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 SIK1P57059 783 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 RBSNQ9H1K0 784 aa15.12■□□□□ 0.01
SCAF11-209ENST00000547018 PHF14O94880 888 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 RPS6KB1P23443 525 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 SLC9C2Q5TAH2 1124 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 SUSD4Q5VX71 490 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 CCDC144CPQ8IYA2 1237 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 INTS4Q96HW7 963 aaKnown RBP15.11■□□□□ 0.01
SCAF11-209ENST00000547018 INCENPQ9NQS7 918 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 SLC4A8Q2Y0W8 1093 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 STOX1Q6ZVD7 989 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 FBXW7Q969H0 707 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 ABCF2Q9UG63 623 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 TCHHQ07283 1943 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 GOLGA6L4A6NEF3 574 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 ST3GAL1Q11201 340 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 ITPK1Q13572 414 aa15.11■□□□□ 0.01
SCAF11-209ENST00000547018 RRP12Q5JTH9 1297 aaKnown RBP15.11■□□□□ 0.01
SCAF11-209ENST00000547018 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
SCAF11-209ENST00000547018 RRAGDQ9NQL2 400 aaPredicted RBP15.11■□□□□ 0.01
SCAF11-209ENST00000547018 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
SCAF11-209ENST00000547018 CTSWP56202 376 aa15.1■□□□□ 0.01
SCAF11-209ENST00000547018 DENND2AQ9ULE3 1009 aa15.1■□□□□ 0.01
SCAF11-209ENST00000547018 RNF113AO15541 343 aaKnown RBP15.1■□□□□ 0.01
SCAF11-209ENST00000547018 F13A1P00488 732 aa15.1■□□□□ 0.01
SCAF11-209ENST00000547018 HSPD1P10809 573 aaKnown RBP15.1■□□□□ 0.01
SCAF11-209ENST00000547018 TOB2Q14106 344 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-209ENST00000547018 OTUD7BQ6GQQ9 843 aa15.09■□□□□ 0.01
SCAF11-209ENST00000547018 MAST3O60307 1309 aa15.09■□□□□ 0.01
SCAF11-209ENST00000547018 ERBB4Q15303 1308 aa15.09■□□□□ 0.01
SCAF11-209ENST00000547018 UBN2Q6ZU65 1347 aa15.09■□□□□ 0.01
SCAF11-209ENST00000547018 GIMAP6Q6P9H5 292 aa15.09■□□□□ 0.01
SCAF11-209ENST00000547018 CCDC82Q8N4S0 544 aa15.09■□□□□ 0.01
SCAF11-209ENST00000547018 CCDC87Q9NVE4 849 aa15.09■□□□□ 0.01
SCAF11-209ENST00000547018 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-209ENST00000547018 STRCQ7RTU9 1775 aa15.08■□□□□ 0.01
SCAF11-209ENST00000547018 MIGA1Q8NAN2 632 aa15.08■□□□□ 0
SCAF11-209ENST00000547018 AKAP2Q9Y2D5 859 aa15.08■□□□□ 0
SCAF11-209ENST00000547018 PTMSP20962 102 aa15.08■□□□□ 0
SCAF11-209ENST00000547018 MCAMP43121 646 aa15.08■□□□□ 0
SCAF11-209ENST00000547018 AFDNP55196 1824 aaKnown RBP15.08■□□□□ 0
SCAF11-209ENST00000547018 GJB4Q9NTQ9 266 aa15.07■□□□□ 0
SCAF11-209ENST00000547018 MTMR6Q9Y217 621 aa15.07■□□□□ 0
SCAF11-209ENST00000547018 XIRP1Q702N8 1843 aaKnown RBP15.07■□□□□ 0
SCAF11-209ENST00000547018 ZSCAN31Q96LW9 406 aaPredicted RBP15.07■□□□□ 0
SCAF11-209ENST00000547018 BCAMP50895 628 aa15.07■□□□□ 0
SCAF11-209ENST00000547018 FTOQ9C0B1 505 aaKnown RBP eCLIP15.07■□□□□ 0
SCAF11-209ENST00000547018 RPAP1Q9BWH6 1393 aaPredicted RBP15.06■□□□□ 0
SCAF11-209ENST00000547018 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
SCAF11-209ENST00000547018 SH2B1Q9NRF2 756 aaPredicted RBP15.06■□□□□ 0
SCAF11-209ENST00000547018 SRP68Q9UHB9 627 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms