RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 STK3Q13188 491 aa14.43□□□□□ -0.1
CCDC38-202ENST00000546386 MCCP23508 829 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 NECAB1Q8N987 351 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 PAG1Q9NWQ8 432 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.42□□□□□ -0.1
CCDC38-202ENST00000546386 ANKRD18BA2A2Z9 1011 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 WASHC4Q2M389 1173 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 TTC39AQ5SRH9 613 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 TTLL5Q6EMB2 1281 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 ZNF34Q8IZ26 560 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 LRRC4BQ9NT99 713 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 RAD50Q92878 1312 aa14.42□□□□□ -0.1
CCDC38-202ENST00000546386 ATP5JP18859 108 aa14.41□□□□□ -0.1
CCDC38-202ENST00000546386 AK2P54819 239 aa14.41□□□□□ -0.1
CCDC38-202ENST00000546386 HAND2P61296 217 aa14.41□□□□□ -0.1
CCDC38-202ENST00000546386 UTP14AQ9BVJ6 771 aaKnown RBP14.41□□□□□ -0.1
CCDC38-202ENST00000546386 PHKA1P46020 1223 aa14.41□□□□□ -0.1
CCDC38-202ENST00000546386 AOX1Q06278 1338 aa14.41□□□□□ -0.1
CCDC38-202ENST00000546386 LAMB4A4D0S4 1761 aa14.41□□□□□ -0.1
CCDC38-202ENST00000546386 COL22A1Q8NFW1 1626 aaPredicted RBP14.41□□□□□ -0.1
CCDC38-202ENST00000546386 CSF1RP07333 972 aa14.4□□□□□ -0.1
CCDC38-202ENST00000546386 ATP2B3Q16720 1220 aa14.4□□□□□ -0.1
CCDC38-202ENST00000546386 MPHOSPH8Q99549 860 aa14.4□□□□□ -0.1
CCDC38-202ENST00000546386 SH3TC1Q8TE82 1336 aa14.4□□□□□ -0.1
CCDC38-202ENST00000546386 USP42Q9H9J4 1324 aaKnown RBP14.4□□□□□ -0.1
CCDC38-202ENST00000546386 RIPOR2Q9Y4F9 1068 aa14.4□□□□□ -0.1
CCDC38-202ENST00000546386 CCDC171Q6TFL3 1326 aa14.4□□□□□ -0.1
CCDC38-202ENST00000546386 PDE8AO60658 829 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 IDH1O75874 414 aaKnown RBP14.39□□□□□ -0.11
CCDC38-202ENST00000546386 PAPPAQ13219 1627 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 TRIM28Q13263 835 aaKnown RBP14.39□□□□□ -0.11
CCDC38-202ENST00000546386 CREB3L3Q68CJ9 461 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 FAM196AQ6ZSG2 479 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 HAUS7Q99871 368 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 PCNTO95613 3336 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 TAF1P21675 1872 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 MCAMP43121 646 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 BCAMP50895 628 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 ARHGEF1Q92888 912 aaKnown RBP14.39□□□□□ -0.11
CCDC38-202ENST00000546386 NAP1L2Q9ULW6 460 aaPredicted RBP14.39□□□□□ -0.11
CCDC38-202ENST00000546386 ZNF609O15014 1411 aa14.39□□□□□ -0.11
CCDC38-202ENST00000546386 MCM4P33991 863 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 RUFY3Q7L099 469 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 RAB11FIP4Q86YS3 637 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 GDPD2Q9HCC8 539 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 TJP1Q07157 1748 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 NUP188Q5SRE5 1749 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 NRAPQ86VF7 1730 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 SLC27A2O14975 620 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 FOSBP53539 338 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 CCDC158Q5M9N0 1113 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 OSBP2Q969R2 916 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 BCL2L12Q9HB09 334 aa14.38□□□□□ -0.11
CCDC38-202ENST00000546386 M0R2C6 588 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 KDM4AO75164 1064 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 DDIT3P35638 169 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
CCDC38-202ENST00000546386 NTSR2O95665 410 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 MCTP1Q6DN14 999 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 INCENPQ9NQS7 918 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 DENND2AQ9ULE3 1009 aa14.37□□□□□ -0.11
CCDC38-202ENST00000546386 ERVV-1B6SEH8 477 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 ZPR1O75312 459 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 NCLP19338 710 aaKnown RBP14.36□□□□□ -0.11
CCDC38-202ENST00000546386 KLRK1P26718 216 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
CCDC38-202ENST00000546386 GPR101Q96P66 508 aaPredicted RBP14.36□□□□□ -0.11
CCDC38-202ENST00000546386 COL4A1P02462 1669 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 NUP98P52948 1817 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 GYG1P46976 350 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 KBTBD3Q8NAB2 608 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 ZDHHC9Q9Y397 364 aa14.36□□□□□ -0.11
CCDC38-202ENST00000546386 PDE8BO95263 885 aa14.35□□□□□ -0.11
CCDC38-202ENST00000546386 CCDC102BQ68D86 513 aa14.35□□□□□ -0.11
CCDC38-202ENST00000546386 MAP4K1Q92918 833 aa14.35□□□□□ -0.11
CCDC38-202ENST00000546386 SMARCC1Q92922 1105 aaPredicted RBP14.35□□□□□ -0.11
CCDC38-202ENST00000546386 GPHNQ9NQX3 736 aaPredicted RBP14.35□□□□□ -0.11
CCDC38-202ENST00000546386 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
CCDC38-202ENST00000546386 CYP21A2P08686 494 aa14.35□□□□□ -0.11
CCDC38-202ENST00000546386 SLC4A8Q2Y0W8 1093 aa14.35□□□□□ -0.11
CCDC38-202ENST00000546386 NBPF5PQ86XG9 351 aaPredicted RBP14.35□□□□□ -0.11
CCDC38-202ENST00000546386 PDRG1Q9NUG6 133 aa14.35□□□□□ -0.11
CCDC38-202ENST00000546386 CYP2E1P05181 493 aaPredicted RBP14.34□□□□□ -0.11
CCDC38-202ENST00000546386 PIH1D3Q9NQM4 214 aaKnown RBP14.34□□□□□ -0.11
CCDC38-202ENST00000546386 RTCBQ9Y3I0 505 aaKnown RBP14.34□□□□□ -0.11
CCDC38-202ENST00000546386 PLEKHG2Q9H7P9 1386 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 APPP05067 770 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 ZKSCAN1P17029 563 aaPredicted RBP14.34□□□□□ -0.11
CCDC38-202ENST00000546386 RFC4P35249 363 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 GSE1Q14687 1217 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 MCMDC2Q4G0Z9 681 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 SLC9C2Q5TAH2 1124 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 NKX2-3Q8TAU0 364 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 SETDB2Q96T68 719 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 TFCP2L1Q9NZI6 479 aa14.34□□□□□ -0.11
CCDC38-202ENST00000546386 RAB3GAP1Q15042 981 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms