RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 ZC3H12CQ9C0D7 883 aaKnown RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 CCDC183Q5T5S1 534 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 DYNC1I1O14576 645 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 GIPC1O14908 333 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 PTGS1P23219 599 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 NSRP1Q9H0G5 558 aaKnown RBP11.37□□□□□ -0.59
TRERF1-205ENST00000541110 SLC4A4Q9Y6R1 1079 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 IVNS1ABPQ9Y6Y0 642 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 RMND1Q9NWS8 449 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 ANKRD30BQ9BXX2 1392 aa11.37□□□□□ -0.59
TRERF1-205ENST00000541110 TOM1O60784 492 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 WAPLQ7Z5K2 1190 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 VPS52Q8N1B4 723 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 SELENOSQ9BQE4 189 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 ZSWIM4Q9H7M6 989 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 M0QZ92 97 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 TTLL3Q9Y4R7 772 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 KIF21BO75037 1637 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 TRERF1Q96PN7 1200 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
TRERF1-205ENST00000541110 EPRSP07814 1512 aaKnown RBP11.36□□□□□ -0.59
TRERF1-205ENST00000541110 CTAGE5O15320 804 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 NBPF7P0C2Y1 421 aaPredicted RBP11.36□□□□□ -0.59
TRERF1-205ENST00000541110 NLRP3Q96P20 1036 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 PRKG1Q13976 671 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 KIF2AO00139 706 aaPredicted RBP11.36□□□□□ -0.59
TRERF1-205ENST00000541110 NYXQ9GZU5 481 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 ANKFY1Q9P2R3 1169 aa11.36□□□□□ -0.59
TRERF1-205ENST00000541110 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 FCHSD2O94868 740 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 PRPHP41219 470 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 NCOA7Q8NI08 942 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 IRAK4Q9NWZ3 460 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 ABL1P00519 1130 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 RRAGBQ5VZM2 374 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 BRD4O60885 1362 aaPredicted RBP11.35□□□□□ -0.59
TRERF1-205ENST00000541110 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 STK25O00506 426 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 TACC3Q9Y6A5 838 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 PPP1R7Q15435 360 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 TMEM57Q8N5G2 664 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 RRP36Q96EU6 259 aaKnown RBP11.35□□□□□ -0.59
TRERF1-205ENST00000541110 HSP90AA4PQ58FG1 418 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 HAUS2Q9NVX0 235 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 PPME1Q9Y570 386 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 F6X3S4 739 aa11.35□□□□□ -0.59
TRERF1-205ENST00000541110 NAA16Q6N069 864 aaPredicted RBP11.35□□□□□ -0.59
TRERF1-205ENST00000541110 N4BP3O15049 544 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 AKR1B10O60218 316 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 SEPT14Q6ZU15 432 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 SCAND2PQ9GZW5 306 aaPredicted RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 SPDYE16A6NNV3 312 aaPredicted RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 SARNPP82979 210 aaKnown RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 CCDC77Q9BR77 488 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 THUMPD2Q9BTF0 503 aaKnown RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 NSMCE1Q8WV22 266 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 CHRNA2Q15822 529 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 STX1AQ16623 288 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 FNBP1Q96RU3 617 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 RTCBQ9Y3I0 505 aaKnown RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 GOLGA6L9A6NEM1 432 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 UBE3BQ7Z3V4 1068 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 ANKS4BQ8N8V4 417 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 TCIRG1Q13488 830 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 PDE3AQ14432 1141 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 GPR162Q16538 588 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 DCAF17Q5H9S7 520 aaPredicted RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 KRT23Q9C075 422 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 TFIP11Q9UBB9 837 aaKnown RBP11.34□□□□□ -0.59
TRERF1-205ENST00000541110 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
TRERF1-205ENST00000541110 C4orf50Q6ZRC1 276 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 SH2B1Q9NRF2 756 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-205ENST00000541110 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 ASIC1P78348 528 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 C16orf45Q96MC5 204 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-205ENST00000541110 KCNK9Q9NPC2 374 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 SEPT6Q14141 434 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 WDR44Q5JSH3 913 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 STX10O60499 249 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 ERCC3P19447 782 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 MSL1Q68DK7 614 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 EVI5LQ96CN4 794 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 SLC52A1Q9NWF4 448 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 CNGA1P29973 690 aa11.33□□□□□ -0.6
TRERF1-205ENST00000541110 RTN1Q16799 776 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms