RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 COG6Q9Y2V7 657 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 VPS8Q8N3P4 1428 aa6.07□□□□□ -1.44
C2CD3-214ENST00000540057 PIK3CDO00329 1044 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 IRS1P35568 1242 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 TLR1Q15399 786 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 WASHC4Q2M389 1173 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 GNASQ5JWF2 1037 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 PPARGC1BQ86YN6 1023 aaKnown RBP6.06□□□□□ -1.44
C2CD3-214ENST00000540057 ZNF295-AS1Q8N0V1 137 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 TRERF1Q96PN7 1200 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 CEP350Q5VT06 3117 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 CCDC144AA2RUR9 1427 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 TNS3Q68CZ2 1445 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 NRKQ7Z2Y5 1582 aa6.06□□□□□ -1.44
C2CD3-214ENST00000540057 SPATA31A5Q5VU36 1347 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 SPATA31A7Q8IWB4 1347 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 KIF1AQ12756 1690 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 MSX1P28360 303 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 GDF10P55107 478 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 MARSP56192 900 aaKnown RBP6.05□□□□□ -1.44
C2CD3-214ENST00000540057 MAP3K10Q02779 954 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 TMEM214Q6NUQ4 689 aaKnown RBP6.05□□□□□ -1.44
C2CD3-214ENST00000540057 FAM196AQ6ZSG2 479 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 RHBDD1Q8TEB9 315 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 RUBCNLQ9H714 662 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 BTG4Q9NY30 223 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 NAIPQ13075 1403 aa6.05□□□□□ -1.44
C2CD3-214ENST00000540057 MYOM1P52179 1685 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 CASZ1Q86V15 1759 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 TMEM229AB2RXF0 380 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 INHAP05111 366 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 BCRP11274 1271 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 MX2P20592 715 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 SOX11P35716 441 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 LBRQ14739 615 aaKnown RBP6.04□□□□□ -1.44
C2CD3-214ENST00000540057 MAP7D1Q3KQU3 841 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 POM121Q96HA1 1249 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 CFHR5Q9BXR6 569 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 NDFIP2Q9NV92 336 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 FMN2Q9NZ56 1722 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 UTRNP46939 3433 aa6.04□□□□□ -1.44
C2CD3-214ENST00000540057 RGPD8O14715 1765 aaPredicted RBP6.03□□□□□ -1.44
C2CD3-214ENST00000540057 COL14A1Q05707 1796 aaKnown RBP6.03□□□□□ -1.44
C2CD3-214ENST00000540057 ATP4AP20648 1035 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 PLA2G4AP47712 749 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 KANK3Q6NY19 840 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 SIRT1Q96EB6 747 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 SCARF2Q96GP6 870 aaPredicted RBP6.03□□□□□ -1.44
C2CD3-214ENST00000540057 SYT17Q9BSW7 474 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 PDGFDQ9GZP0 370 aaPredicted RBP6.03□□□□□ -1.44
C2CD3-214ENST00000540057 CRISPLD1Q9H336 500 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 DNAAF2Q9NVR5 837 aaKnown RBP6.03□□□□□ -1.44
C2CD3-214ENST00000540057 USP3Q9Y6I4 520 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 DNMT3AQ9Y6K1 912 aaPredicted RBP6.03□□□□□ -1.44
C2CD3-214ENST00000540057 SBNO1A3KN83 1393 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 NUP155O75694 1391 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 CLTCL1P53675 1640 aa6.03□□□□□ -1.44
C2CD3-214ENST00000540057 KIF1BO60333 1816 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 OIP5O43482 229 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 PSME1Q06323 249 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 SEMA3FQ13275 785 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 WAPLQ7Z5K2 1190 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 ALG2Q9H553 416 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 LRRC4BQ9NT99 713 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 IQSEC3Q9UPP2 1182 aaPredicted RBP6.02□□□□□ -1.45
C2CD3-214ENST00000540057 PCDHGA11Q9Y5H2 935 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 ARHGEF10O15013 1369 aa6.02□□□□□ -1.45
C2CD3-214ENST00000540057 SPATA31A1Q5TZJ5 1347 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 CNTNAP5Q8WYK1 1306 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 RRBP1Q9P2E9 1410 aaKnown RBP6.01□□□□□ -1.45
C2CD3-214ENST00000540057 ZBTB7AO95365 584 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 GTF2E1P29083 439 aaPredicted RBP6.01□□□□□ -1.45
C2CD3-214ENST00000540057 MAP2K3P46734 347 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 SMTNP53814 917 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 MTFR1Q15390 333 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 C1orf229Q6ZS94 237 aaPredicted RBP6.01□□□□□ -1.45
C2CD3-214ENST00000540057 KLRG1Q96E93 195 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 SLC4A9Q96Q91 983 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 OXCT2Q9BYC2 517 aaPredicted RBP6.01□□□□□ -1.45
C2CD3-214ENST00000540057 ENAMQ9NRM1 1142 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 HCN2Q9UL51 889 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 PLEKHH1Q9ULM0 1364 aa6.01□□□□□ -1.45
C2CD3-214ENST00000540057 SHISA8B8ZZ34 492 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 C2CD2LO14523 706 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 BNIP3LO60238 219 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 TBC1D9Q6ZT07 1266 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 ADAMTS19Q8TE59 1207 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 ABHD17AQ96GS6 310 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 SERTAD1Q9UHV2 236 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 ATXN7L1Q9ULK2 861 aaPredicted RBP6□□□□□ -1.45
C2CD3-214ENST00000540057 NSFL1CQ9UNZ2 370 aaKnown RBP6□□□□□ -1.45
C2CD3-214ENST00000540057 NRXN1Q9ULB1 1477 aa6□□□□□ -1.45
C2CD3-214ENST00000540057 TECPR2O15040 1411 aa5.99□□□□□ -1.45
C2CD3-214ENST00000540057 SHANK3Q9BYB0 1731 aa5.99□□□□□ -1.45
C2CD3-214ENST00000540057 IFT172Q9UG01 1749 aa5.99□□□□□ -1.45
C2CD3-214ENST00000540057 RGPD3A6NKT7 1758 aaPredicted RBP5.99□□□□□ -1.45
C2CD3-214ENST00000540057 PPLO60437 1756 aa5.99□□□□□ -1.45
C2CD3-214ENST00000540057 RGPD4Q7Z3J3 1758 aa5.99□□□□□ -1.45
C2CD3-214ENST00000540057 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
C2CD3-214ENST00000540057 ITGB2P05107 769 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms