RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 DDX17Q92841 729 aaKnown RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 RIMS2Q9UQ26 1411 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 NF2P35240 595 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 HLTFQ14527 1009 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 JDP2Q8WYK2 163 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 MCM9Q9NXL9 1143 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 SERPINA10Q9UK55 444 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 ZBTB43O43298 467 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 LMOD1P29536 600 aaPredicted RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 TFCP2Q12800 502 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 RAB3GAP1Q15042 981 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 EIF6P56537 245 aaKnown RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 STX1AQ16623 288 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
LINC00346-201ENST00000538077 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
LINC00346-201ENST00000538077 ARID5AQ03989 594 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 ZSWIM4Q9H7M6 989 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 C16orf45Q96MC5 204 aaPredicted RBP12.82□□□□□ -0.36
LINC00346-201ENST00000538077 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
LINC00346-201ENST00000538077 PAG1Q9NWQ8 432 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 TTC21AQ8NDW8 1320 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 PLEKHH1Q9ULM0 1364 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
LINC00346-201ENST00000538077 JADE2Q9NQC1 790 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 GRM8O00222 908 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 ZYXQ15942 572 aaKnown RBP12.82□□□□□ -0.36
LINC00346-201ENST00000538077 OTUD6BQ8N6M0 293 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 UIMC1Q96RL1 719 aa12.82□□□□□ -0.36
LINC00346-201ENST00000538077 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
LINC00346-201ENST00000538077 ESR2Q92731 530 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 ALS2CR12Q96Q35 445 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 CNPY2Q9Y2B0 182 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 HOMER2Q9NSB8 354 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 TEX14Q8IWB6 1497 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 ITSN2Q9NZM3 1697 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
LINC00346-201ENST00000538077 MCM7P33993 719 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 PABPN1LA6NDY0 278 aaKnown RBP12.81□□□□□ -0.36
LINC00346-201ENST00000538077 ARL1P40616 181 aaPredicted RBP12.81□□□□□ -0.36
LINC00346-201ENST00000538077 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 ERMNQ8TAM6 284 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
LINC00346-201ENST00000538077 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
LINC00346-201ENST00000538077 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
LINC00346-201ENST00000538077 RBM8AQ9Y5S9 174 aaKnown RBP12.8□□□□□ -0.36
LINC00346-201ENST00000538077 SDSP20132 328 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 TNNI2P48788 182 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 MCMDC2Q4G0Z9 681 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 GIMAP6Q6P9H5 292 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 TBC1D5Q92609 795 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 TPTE2Q6XPS3 522 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 PRDM10Q9NQV6 1147 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 PROCA1Q8NCQ7 364 aaPredicted RBP12.8□□□□□ -0.36
LINC00346-201ENST00000538077 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
LINC00346-201ENST00000538077 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
LINC00346-201ENST00000538077 DHX58Q96C10 678 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 ASXL2Q76L83 1435 aa12.8□□□□□ -0.36
LINC00346-201ENST00000538077 MAATS1Q7Z4T9 603 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
LINC00346-201ENST00000538077 MYZAPP0CAP1 466 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 PAFAH1B1P43034 410 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 PTGS1P23219 599 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 SYKP43405 635 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 ZFP91Q96JP5 570 aaPredicted RBP12.79□□□□□ -0.36
LINC00346-201ENST00000538077 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 RNF187Q5TA31 235 aaPredicted RBP12.79□□□□□ -0.36
LINC00346-201ENST00000538077 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
LINC00346-201ENST00000538077 ADCY5O95622 1261 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 LDHBP07195 334 aaKnown RBP12.79□□□□□ -0.36
LINC00346-201ENST00000538077 APOBRQ0VD83 1088 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 SYCP2Q9BX26 1530 aa12.79□□□□□ -0.36
LINC00346-201ENST00000538077 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 CTAGE5O15320 804 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 ASIC1P78348 528 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 CBX1P83916 185 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
LINC00346-201ENST00000538077 CCDC102BQ68D86 513 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 KSR2Q6VAB6 950 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 CHMP2AO43633 222 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 UFL1O94874 794 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
LINC00346-201ENST00000538077 NSD2O96028 1365 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms