RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 EDN3P14138 238 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 IRX6P78412 446 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-216ENST00000534389 PSMD2Q13200 908 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 GRIN2CQ14957 1233 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 ECM1Q16610 540 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 ZNF468Q5VIY5 522 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-216ENST00000534389 HFE2Q6ZVN8 426 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 FAM35AQ86V20 835 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 GOLGA6L1Q8N7Z2 621 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 C1orf127Q8N9H9 656 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 FAM129BQ96TA1 746 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 DNAJC25Q9H1X3 360 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 RRAGCQ9HB90 399 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 TLR7Q9NYK1 1049 aaKnown RBP4.34□□□□□ -1.71
CSDE1-216ENST00000534389 GDF2Q9UK05 429 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-216ENST00000534389 SPG7Q9UQ90 795 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 IGF1RP08069 1367 aa4.34□□□□□ -1.71
CSDE1-216ENST00000534389 RSF1Q96T23 1441 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 DHX57Q6P158 1386 aaKnown RBP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 SMNDC1O75940 238 aaKnown RBP eCLIP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 EGFRP00533 1210 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 CPB1P15086 417 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 ELMSAN1Q6PJG2 1045 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 XKR5Q6UX68 686 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 DNAJC14Q6Y2X3 702 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 NPM2Q86SE8 214 aaKnown RBP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 NEDD1Q8NHV4 660 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 ALKBH8Q96BT7 664 aaKnown RBP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 OXCT2Q9BYC2 517 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 EHD4Q9H223 541 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 DNAJB12Q9NXW2 375 aaKnown RBP4.33□□□□□ -1.72
CSDE1-216ENST00000534389 VTI1BQ9UEU0 232 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 GGA1Q9UJY5 639 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 HCN2Q9UL51 889 aa4.33□□□□□ -1.72
CSDE1-216ENST00000534389 CEP162Q5TB80 1403 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 EREGO14944 169 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 MAP3K6O95382 1288 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 ADAMTS2O95450 1211 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 ARAFP10398 606 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 ADH7P40394 386 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 SRSF11Q05519 484 aaKnown RBP4.32□□□□□ -1.72
CSDE1-216ENST00000534389 NPAS4Q8IUM7 802 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 RGS22Q8NE09 1264 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 OR13H1Q8NG92 308 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 ASAP3Q8TDY4 903 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 CCDC74AQ96AQ1 378 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 ZFYVE28Q9HCC9 887 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 NPHS2Q9NP85 383 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 AVENQ9NQS1 362 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-216ENST00000534389 ENAMQ9NRM1 1142 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 CNTN3Q9P232 1028 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 ZFATQ9P243 1243 aa4.32□□□□□ -1.72
CSDE1-216ENST00000534389 RB1CC1Q8TDY2 1594 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 LOC102724428A0A0B4J2F2 783 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 E9PSI1 815 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 J3QW42 95 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 C2CD2LO14523 706 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 SIN3BO75182 1162 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 PRPF40AO75400 957 aaKnown RBP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 RGS9O75916 674 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 CYP2E1P05181 493 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 NRLP54845 237 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 SIK1P57059 783 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 FMR1Q06787 632 aaKnown RBP eCLIP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 COL19A1Q14993 1142 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 ENOX2Q16206 610 aaKnown RBP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 CEP135Q66GS9 1140 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 GDF6Q6KF10 455 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 GALNT6Q8NCL4 622 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 FBF1Q8TES7 1133 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 NUDT8Q8WV74 236 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 DUSP9Q99956 384 aaKnown RBP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 JPH1Q9HDC5 661 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-216ENST00000534389 SLC6A14Q9UN76 642 aa4.31□□□□□ -1.72
CSDE1-216ENST00000534389 ELOA3CA0A087WX78 387 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-216ENST00000534389 ELOA3DA6NLF2 546 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-216ENST00000534389 SLURP2P0DP57 97 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 EIF4BP23588 611 aaKnown RBP4.3□□□□□ -1.72
CSDE1-216ENST00000534389 GRNP28799 593 aaKnown RBP4.3□□□□□ -1.72
CSDE1-216ENST00000534389 SOX18P35713 384 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 CABP4P57796 275 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 GPLD1P80108 840 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 DSC3Q14574 896 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 ELOA3BQ3SY89 546 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.3□□□□□ -1.72
CSDE1-216ENST00000534389 USPL1Q5W0Q7 1092 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 PSAPL1Q6NUJ1 521 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 DTHD1Q6ZMT9 781 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 SVOPQ8N4V2 548 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 ELOA3Q8NG57 546 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 EPS8L3Q8TE67 593 aaKnown RBP4.3□□□□□ -1.72
CSDE1-216ENST00000534389 OSMRQ99650 979 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 LIN7BQ9HAP6 207 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 PARP2Q9UGN5 583 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 WWC3Q9ULE0 1092 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 TRAK1Q9UPV9 953 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 NACADO15069 1562 aa4.3□□□□□ -1.72
CSDE1-216ENST00000534389 TNIKQ9UKE5 1360 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 SORBS3O60504 671 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 BCRP11274 1271 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms