RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 IL22RA1Q8N6P7 574 aa9.82□□□□□ -0.84
CASP4-210ENST00000531546 CALR3Q96L12 384 aaKnown RBP9.82□□□□□ -0.84
CASP4-210ENST00000531546 MUC3BQ9H195 1237 aa9.82□□□□□ -0.84
CASP4-210ENST00000531546 MYO15BQ96JP2 1530 aa9.82□□□□□ -0.84
CASP4-210ENST00000531546 OPLAHO14841 1288 aa9.81□□□□□ -0.84
CASP4-210ENST00000531546 ALX3O95076 343 aa9.81□□□□□ -0.84
CASP4-210ENST00000531546 SSTR4P31391 388 aa9.81□□□□□ -0.84
CASP4-210ENST00000531546 CD97P48960 835 aa9.81□□□□□ -0.84
CASP4-210ENST00000531546 TREML1Q86YW5 311 aa9.81□□□□□ -0.84
CASP4-210ENST00000531546 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
CASP4-210ENST00000531546 CMTR1Q8N1G2 835 aaKnown RBP9.81□□□□□ -0.84
CASP4-210ENST00000531546 NSUN5Q96P11 429 aaKnown RBP9.81□□□□□ -0.84
CASP4-210ENST00000531546 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
CASP4-210ENST00000531546 J3QW42 95 aa9.8□□□□□ -0.84
CASP4-210ENST00000531546 ARXQ96QS3 562 aa9.8□□□□□ -0.84
CASP4-210ENST00000531546 USP20Q9Y2K6 914 aa9.8□□□□□ -0.84
CASP4-210ENST00000531546 RAXQ9Y2V3 346 aa9.8□□□□□ -0.84
CASP4-210ENST00000531546 MMP20O60882 483 aa9.79□□□□□ -0.84
CASP4-210ENST00000531546 GLB1P16278 677 aa9.79□□□□□ -0.84
CASP4-210ENST00000531546 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
CASP4-210ENST00000531546 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
CASP4-210ENST00000531546 LRFN2Q9ULH4 789 aa9.78□□□□□ -0.84
CASP4-210ENST00000531546 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
CASP4-210ENST00000531546 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
CASP4-210ENST00000531546 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.77□□□□□ -0.85
CASP4-210ENST00000531546 PPME1Q9Y570 386 aa9.77□□□□□ -0.85
CASP4-210ENST00000531546 KCNMB2Q9Y691 235 aa9.77□□□□□ -0.85
CASP4-210ENST00000531546 IRAK1P51617 712 aa9.76□□□□□ -0.85
CASP4-210ENST00000531546 AGGF1Q8N302 714 aaeCLIP9.76□□□□□ -0.85
CASP4-210ENST00000531546 KIAA1324LA8MWY0 1029 aaPredicted RBP9.75□□□□□ -0.85
CASP4-210ENST00000531546 COBLO75128 1261 aa9.75□□□□□ -0.85
CASP4-210ENST00000531546 TXKP42681 527 aa9.75□□□□□ -0.85
CASP4-210ENST00000531546 NLRP13Q86W25 1043 aa9.75□□□□□ -0.85
CASP4-210ENST00000531546 FAM200AQ8TCP9 573 aa9.75□□□□□ -0.85
CASP4-210ENST00000531546 CEP41Q9BYV8 373 aa9.75□□□□□ -0.85
CASP4-210ENST00000531546 STOML1Q9UBI4 398 aa9.75□□□□□ -0.85
CASP4-210ENST00000531546 TRIM33Q9UPN9 1127 aa9.75□□□□□ -0.85
CASP4-210ENST00000531546 DHX15O43143 795 aaKnown RBP9.74□□□□□ -0.85
CASP4-210ENST00000531546 UVSSAQ2YD98 709 aa9.74□□□□□ -0.85
CASP4-210ENST00000531546 COX20Q5RI15 118 aa9.72□□□□□ -0.85
CASP4-210ENST00000531546 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
CASP4-210ENST00000531546 TGFB1P01137 390 aa9.71□□□□□ -0.86
CASP4-210ENST00000531546 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
CASP4-210ENST00000531546 GRIK1P39086 918 aa9.71□□□□□ -0.86
CASP4-210ENST00000531546 SPACA7Q96KW9 195 aa9.71□□□□□ -0.86
CASP4-210ENST00000531546 KRTAP9-9Q9BYP9 154 aa9.71□□□□□ -0.86
CASP4-210ENST00000531546 KRTAP9-4Q9BYQ2 154 aa9.71□□□□□ -0.86
CASP4-210ENST00000531546 SMNDC1O75940 238 aaKnown RBP eCLIP9.7□□□□□ -0.86
CASP4-210ENST00000531546 CD68P34810 354 aaPredicted RBP9.7□□□□□ -0.86
CASP4-210ENST00000531546 FKBP5Q13451 457 aaPredicted RBP9.7□□□□□ -0.86
CASP4-210ENST00000531546 ACAD11Q709F0 780 aa9.7□□□□□ -0.86
CASP4-210ENST00000531546 OR13H1Q8NG92 308 aa9.7□□□□□ -0.86
CASP4-210ENST00000531546 FMNL2Q96PY5 1086 aa9.7□□□□□ -0.86
CASP4-210ENST00000531546 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
CASP4-210ENST00000531546 GP2P55259 537 aaKnown RBP9.69□□□□□ -0.86
CASP4-210ENST00000531546 HYAL2Q12891 473 aa9.69□□□□□ -0.86
CASP4-210ENST00000531546 TRIP4Q15650 581 aaPredicted RBP9.69□□□□□ -0.86
CASP4-210ENST00000531546 SWI5Q1ZZU3 235 aa9.69□□□□□ -0.86
CASP4-210ENST00000531546 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
CASP4-210ENST00000531546 ETFBKMTQ8IXQ9 262 aa9.69□□□□□ -0.86
CASP4-210ENST00000531546 GALNT11Q8NCW6 608 aa9.69□□□□□ -0.86
CASP4-210ENST00000531546 UTP4Q969X6 686 aaKnown RBP9.69□□□□□ -0.86
CASP4-210ENST00000531546 LINC01387J3KSC0 135 aa9.68□□□□□ -0.86
CASP4-210ENST00000531546 NFIAQ12857 509 aa9.68□□□□□ -0.86
CASP4-210ENST00000531546 C16orf46Q6P387 395 aa9.68□□□□□ -0.86
CASP4-210ENST00000531546 ARMC10Q8N2F6 343 aa9.68□□□□□ -0.86
CASP4-210ENST00000531546 UBAP1LF5GYI3 381 aa9.67□□□□□ -0.86
CASP4-210ENST00000531546 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
CASP4-210ENST00000531546 CDC27P30260 824 aa9.67□□□□□ -0.86
CASP4-210ENST00000531546 CEP135Q66GS9 1140 aa9.67□□□□□ -0.86
CASP4-210ENST00000531546 FAM117BQ6P1L5 589 aa9.67□□□□□ -0.86
CASP4-210ENST00000531546 ZDHHC13Q8IUH4 622 aa9.67□□□□□ -0.86
CASP4-210ENST00000531546 PIK3R5Q8WYR1 880 aa9.67□□□□□ -0.86
CASP4-210ENST00000531546 NOVA2Q9UNW9 492 aaKnown RBP9.67□□□□□ -0.86
CASP4-210ENST00000531546 A6NJR5 290 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 WISP1O95388 367 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 RFX1P22670 979 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 KLHL23Q8NBE8 558 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 COL26A1Q96A83 441 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 DBNDD2Q9BQY9 259 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 LACRTQ9GZZ8 138 aa9.66□□□□□ -0.86
CASP4-210ENST00000531546 FNDC3AQ9Y2H6 1198 aaKnown RBP9.66□□□□□ -0.86
CASP4-210ENST00000531546 OAS3Q9Y6K5 1087 aaKnown RBP9.66□□□□□ -0.86
CASP4-210ENST00000531546 ACIN1Q9UKV3 1341 aaKnown RBP9.65□□□□□ -0.86
CASP4-210ENST00000531546 MED26O95402 600 aa9.65□□□□□ -0.86
CASP4-210ENST00000531546 ATP11AP98196 1134 aa9.65□□□□□ -0.86
CASP4-210ENST00000531546 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.86
CASP4-210ENST00000531546 C7orf69Q9H7B7 122 aa9.65□□□□□ -0.86
CASP4-210ENST00000531546 TAL1P17542 331 aaPredicted RBP9.64□□□□□ -0.87
CASP4-210ENST00000531546 SPINK2P20155 84 aa9.64□□□□□ -0.87
CASP4-210ENST00000531546 SCNN1AP37088 669 aa9.64□□□□□ -0.87
CASP4-210ENST00000531546 TTC39BQ5VTQ0 682 aaPredicted RBP9.64□□□□□ -0.87
CASP4-210ENST00000531546 TXNDC11Q6PKC3 985 aa9.64□□□□□ -0.87
CASP4-210ENST00000531546 FAM46AQ96IP4 442 aaKnown RBP9.64□□□□□ -0.87
CASP4-210ENST00000531546 MYRFLQ96LU7 910 aa9.64□□□□□ -0.87
CASP4-210ENST00000531546 DUOXA2Q1HG44 320 aa9.63□□□□□ -0.87
CASP4-210ENST00000531546 RNF43Q68DV7 783 aa9.63□□□□□ -0.87
CASP4-210ENST00000531546 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
CASP4-210ENST00000531546 NESP48681 1621 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms