RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
LAMA4-220ENST00000523765 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
LAMA4-220ENST00000523765 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
LAMA4-220ENST00000523765 KIF6Q6ZMV9 814 aa12.93□□□□□ -0.34
LAMA4-220ENST00000523765 DPF2Q92785 391 aa12.93□□□□□ -0.34
LAMA4-220ENST00000523765 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
LAMA4-220ENST00000523765 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
LAMA4-220ENST00000523765 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
LAMA4-220ENST00000523765 THUMPD2Q9BTF0 503 aaKnown RBP12.93□□□□□ -0.34
LAMA4-220ENST00000523765 COL6A3P12111 3177 aa12.93□□□□□ -0.34
LAMA4-220ENST00000523765 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
LAMA4-220ENST00000523765 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-220ENST00000523765 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
LAMA4-220ENST00000523765 DCPSQ96C86 337 aaKnown RBP12.92□□□□□ -0.34
LAMA4-220ENST00000523765 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
LAMA4-220ENST00000523765 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
LAMA4-220ENST00000523765 RBBP6Q7Z6E9 1792 aaKnown RBP12.92□□□□□ -0.34
LAMA4-220ENST00000523765 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
LAMA4-220ENST00000523765 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
LAMA4-220ENST00000523765 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
LAMA4-220ENST00000523765 LRP10Q7Z4F1 713 aa12.91□□□□□ -0.34
LAMA4-220ENST00000523765 GPR25O00155 361 aa12.9□□□□□ -0.34
LAMA4-220ENST00000523765 BBOX1O75936 387 aa12.9□□□□□ -0.34
LAMA4-220ENST00000523765 PKN2Q16513 984 aaKnown RBP12.9□□□□□ -0.34
LAMA4-220ENST00000523765 FBXO46Q6PJ61 603 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-220ENST00000523765 TMX4Q9H1E5 349 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-220ENST00000523765 POLLQ9UGP5 575 aa12.9□□□□□ -0.34
LAMA4-220ENST00000523765 A0A0C4DFX4 3053 aa12.9□□□□□ -0.34
LAMA4-220ENST00000523765 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
LAMA4-220ENST00000523765 ANXA1P04083 346 aa12.89□□□□□ -0.35
LAMA4-220ENST00000523765 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-220ENST00000523765 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
LAMA4-220ENST00000523765 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
LAMA4-220ENST00000523765 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
LAMA4-220ENST00000523765 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
LAMA4-220ENST00000523765 PPP1R42Q7Z4L9 355 aa12.89□□□□□ -0.35
LAMA4-220ENST00000523765 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
LAMA4-220ENST00000523765 UTP14AQ9BVJ6 771 aaKnown RBP12.89□□□□□ -0.35
LAMA4-220ENST00000523765 PSME4Q14997 1843 aa12.88□□□□□ -0.35
LAMA4-220ENST00000523765 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
LAMA4-220ENST00000523765 ECE2O60344 883 aa12.88□□□□□ -0.35
LAMA4-220ENST00000523765 GRAPQ13588 217 aa12.88□□□□□ -0.35
LAMA4-220ENST00000523765 PDIA6Q15084 440 aa12.88□□□□□ -0.35
LAMA4-220ENST00000523765 PROSER3Q2NL68 480 aa12.88□□□□□ -0.35
LAMA4-220ENST00000523765 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
LAMA4-220ENST00000523765 SULF1Q8IWU6 871 aa12.88□□□□□ -0.35
LAMA4-220ENST00000523765 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-220ENST00000523765 GPSM2P81274 684 aa12.87□□□□□ -0.35
LAMA4-220ENST00000523765 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
LAMA4-220ENST00000523765 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
LAMA4-220ENST00000523765 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
LAMA4-220ENST00000523765 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-220ENST00000523765 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-220ENST00000523765 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
LAMA4-220ENST00000523765 TM4SF4P48230 202 aa12.86□□□□□ -0.35
LAMA4-220ENST00000523765 SCARF1Q14162 830 aa12.86□□□□□ -0.35
LAMA4-220ENST00000523765 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
LAMA4-220ENST00000523765 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
LAMA4-220ENST00000523765 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
LAMA4-220ENST00000523765 GABBR2O75899 941 aa12.85□□□□□ -0.35
LAMA4-220ENST00000523765 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
LAMA4-220ENST00000523765 EN2P19622 333 aaPredicted RBP12.85□□□□□ -0.35
LAMA4-220ENST00000523765 CAP1Q01518 475 aa12.85□□□□□ -0.35
LAMA4-220ENST00000523765 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
LAMA4-220ENST00000523765 FKTNO75072 461 aa12.84□□□□□ -0.35
LAMA4-220ENST00000523765 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
LAMA4-220ENST00000523765 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-220ENST00000523765 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
LAMA4-220ENST00000523765 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
LAMA4-220ENST00000523765 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.36
LAMA4-220ENST00000523765 FZD1Q9UP38 647 aa12.83□□□□□ -0.36
LAMA4-220ENST00000523765 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
LAMA4-220ENST00000523765 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
LAMA4-220ENST00000523765 TBC1D16Q8TBP0 767 aa12.82□□□□□ -0.36
LAMA4-220ENST00000523765 TRMT112Q9UI30 125 aaKnown RBP12.82□□□□□ -0.36
LAMA4-220ENST00000523765 LAMB1P07942 1786 aa12.81□□□□□ -0.36
LAMA4-220ENST00000523765 EIF2S2P20042 333 aaKnown RBP12.81□□□□□ -0.36
LAMA4-220ENST00000523765 FKBP1BP68106 108 aa12.81□□□□□ -0.36
LAMA4-220ENST00000523765 PTPN12Q05209 780 aaKnown RBP12.81□□□□□ -0.36
LAMA4-220ENST00000523765 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
LAMA4-220ENST00000523765 NECTIN2Q92692 538 aa12.81□□□□□ -0.36
LAMA4-220ENST00000523765 GMLQ99445 158 aa12.81□□□□□ -0.36
LAMA4-220ENST00000523765 TRIM17Q9Y577 477 aa12.81□□□□□ -0.36
LAMA4-220ENST00000523765 WTIPA6NIX2 430 aaPredicted RBP12.8□□□□□ -0.36
LAMA4-220ENST00000523765 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
LAMA4-220ENST00000523765 PRKG1Q13976 671 aa12.8□□□□□ -0.36
LAMA4-220ENST00000523765 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
LAMA4-220ENST00000523765 MXD3Q9BW11 206 aa12.8□□□□□ -0.36
LAMA4-220ENST00000523765 CFHR5Q9BXR6 569 aa12.8□□□□□ -0.36
LAMA4-220ENST00000523765 MYOZ2Q9NPC6 264 aa12.8□□□□□ -0.36
LAMA4-220ENST00000523765 SH3TC1Q8TE82 1336 aa12.8□□□□□ -0.36
LAMA4-220ENST00000523765 ZNF609O15014 1411 aa12.79□□□□□ -0.36
LAMA4-220ENST00000523765 DLL1O00548 723 aa12.79□□□□□ -0.36
LAMA4-220ENST00000523765 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-220ENST00000523765 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
LAMA4-220ENST00000523765 XAGE3Q8WTP9 111 aa12.79□□□□□ -0.36
LAMA4-220ENST00000523765 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
LAMA4-220ENST00000523765 TMC4Q7Z404 712 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms