RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 TRIP4Q15650 581 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 USPL1Q5W0Q7 1092 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 PDE12Q6L8Q7 609 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 BTLAQ7Z6A9 289 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 C7orf43Q8WVR3 580 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 CCDC74AQ96AQ1 378 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 SIN3AQ96ST3 1273 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 C12orf49Q9H741 205 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 NLRP2Q9NX02 1062 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 TOR4AQ9NXH8 423 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 RTCBQ9Y3I0 505 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 CDC42BPAQ5VT25 1732 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 EPB42P16452 691 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 INPP5BP32019 993 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 IRS1P35568 1242 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 POU4F2Q12837 409 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 ARSJQ5FYB0 599 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 PI16Q6UXB8 463 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 LRRC69Q6ZNQ3 347 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 CMTR1Q8N1G2 835 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 HPS1Q92902 700 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 RRP7BPQ9NSQ0 103 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 SHANK2Q9UPX8 1470 aa6.76□□□□□ -1.33
CTNNA1-212ENST00000518919 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 A0A0G2JS52 829 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 GIPC1O14908 333 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 CAPN5O15484 640 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 BMP2P12643 396 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 PRICKLE2Q7Z3G6 844 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 FAM177A1Q8N128 213 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 SLC43A3Q8NBI5 491 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 RNF217Q8TC41 542 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 EPS8L3Q8TE67 593 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 GJA3Q9Y6H8 435 aa6.75□□□□□ -1.33
CTNNA1-212ENST00000518919 TTC37Q6PGP7 1564 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 A0A1B0GTH6 734 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 TNNI2P48788 182 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 TYRO3Q06418 890 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 ZNF394Q53GI3 561 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 C6orf118Q5T5N4 469 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 HS2ST1Q7LGA3 356 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 LYSMD3Q7Z3D4 306 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 USP48Q86UV5 1035 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 ZNF654Q8IZM8 581 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 ELP3Q9H9T3 547 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 ZFYVE28Q9HCC9 887 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 PRKAG2Q9UGJ0 569 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 GGT7Q9UJ14 662 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 PCDHGB7Q9Y5F8 929 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 KCNMB2Q9Y691 235 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 PREX2Q70Z35 1606 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
CTNNA1-212ENST00000518919 UHRF1BP1LA0JNW5 1464 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 USP17L7P0C7H9 530 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 RHOQP17081 205 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 MSX1P28360 303 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 WDR44Q5JSH3 913 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 OSBPL7Q9BZF2 842 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 TIMMDC1Q9NPL8 285 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 TMEM63CQ9P1W3 806 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 FAM8A1Q9UBU6 413 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 CFDP1Q9UEE9 299 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 INPP5FQ9Y2H2 1132 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 NCOA1Q15788 1441 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 ARHGEF5Q12774 1597 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 PZPP20742 1482 aa6.73□□□□□ -1.33
CTNNA1-212ENST00000518919 A0A1W2PNR3 127 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 XYLBO75191 536 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 GADD45BO75293 160 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 POLR3DP05423 398 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 ATP2B1P20020 1258 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 DNAJA1P31689 397 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 NEUROD1Q13562 356 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 MEI1Q5TIA1 1274 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 CEP63Q96MT8 703 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 DNAJC2Q99543 621 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 SRCIN1Q9C0H9 1055 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 DDX41Q9UJV9 622 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 C9orf84Q5VXU9 1444 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 MBD5Q9P267 1494 aa6.72□□□□□ -1.33
CTNNA1-212ENST00000518919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.71□□□□□ -1.33
CTNNA1-212ENST00000518919 PLEKHD1A6NEE1 506 aa6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 HMGB1P09429 215 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 ST13P50502 369 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 PRR20EP86478 221 aa6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 PRR20CP86479 221 aa6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 PRR20DP86480 221 aa6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 PRR20BP86481 221 aa6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 PRR20AP86496 221 aa6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 TAF1CQ15572 869 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 DHX38Q92620 1227 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 ABI2Q9NYB9 513 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-212ENST00000518919 ZCCHC11Q5TAX3 1644 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms