RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 GNAI3P08754 354 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 GJB2P29033 226 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 IL13P35225 146 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 AK2P54819 239 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 ATP8B2P98198 1209 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 DNM1Q05193 864 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 NPATQ14207 1427 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 NAA30Q147X3 362 aaPredicted RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 ELF2Q15723 593 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 TSR1Q2NL82 804 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 FOXD4L6Q3SYB3 417 aaPredicted RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 C6orf132Q5T0Z8 1188 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 TMEM132EQ6IEE7 984 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 FOXD4L3Q6VB84 417 aaPredicted RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 RUFY3Q7L099 469 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 LUZP1Q86V48 1076 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 TEX2Q8IWB9 1127 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 CCAR2Q8N163 923 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 AFAP1Q8N556 730 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 IQUBQ8NA54 791 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 SPATA32Q96LK8 384 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 SRRTQ9BXP5 876 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 UPF3BQ9BZI7 483 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 UBXN6Q9BZV1 441 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 YTHDC2Q9H6S0 1430 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 GOPCQ9HD26 462 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 ZNF446Q9NWS9 450 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 GEMIN8Q9NWZ8 242 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 PSD3Q9NYI0 1048 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 IMPACTQ9P2X3 320 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 POLKQ9UBT6 870 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 FHOD1Q9Y613 1164 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 PXDNLA1KZ92 1463 aa7.48□□□□□ -1.21
CALCOCO2-224ENST00000514962 GOLGA6L19H0YKK7 550 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 CHL1O00533 1208 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 SGSM2O43147 1006 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 RAB11FIP3O75154 756 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 ZRANB2O95218 330 aaKnown RBP eCLIP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 PNMA6AP0CW24 399 aaPredicted RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 ZNF165P49910 485 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 SRPK2P78362 688 aaKnown RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 CCZ1BP86790 482 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 CCZ1P86791 482 aaPredicted RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 RAD51AP2Q09MP3 1159 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 CCDC93Q567U6 631 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 TTC6Q86TZ1 520 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 ZNF526Q8TF50 670 aaPredicted RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 RILPL2Q969X0 211 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 THUMPD2Q9BTF0 503 aaKnown RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 LSG1Q9H089 658 aaKnown RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 ALDH8A1Q9H2A2 487 aaPredicted RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 HCSTQ9UBK5 93 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 NRBP1Q9UHY1 535 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 DLC1Q96QB1 1528 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 CHD1O14646 1710 aa7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 XRN1Q8IZH2 1706 aaKnown RBP7.47□□□□□ -1.21
CALCOCO2-224ENST00000514962 PLEKHG3A1L390 1219 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 GOLGA6L4A6NEF3 574 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 CCDC69A6NI79 296 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 ELL2O00472 640 aaPredicted RBP7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 NRDCO43847 1150 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 SKILP12757 684 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 LIG1P18858 919 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 TNNT3P45378 269 aaPredicted RBP7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 PLA2G4AP47712 749 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 SNW1Q13573 536 aaKnown RBP7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 MCM6Q14566 821 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 IQCB1Q15051 598 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 STX1AQ16623 288 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 CCDC144BQ3MJ40 725 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 TMCO3Q6UWJ1 677 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 CCDC144CPQ8IYA2 1237 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 CCDC150Q8NCX0 1101 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 RUFY2Q8WXA3 655 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 KCTD12Q96CX2 325 aaKnown RBP7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 OSBPL5Q9H0X9 879 aaPredicted RBP7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 HYPKQ9NX55 129 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 RABGEF1Q9UJ41 708 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.46□□□□□ -1.222e-7■■■□□ 16
CALCOCO2-224ENST00000514962 SOS1Q07889 1333 aaPredicted RBP7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 PHLPP2Q6ZVD8 1323 aa7.46□□□□□ -1.22
CALCOCO2-224ENST00000514962 EDC4Q6P2E9 1401 aaKnown RBP7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 COL9A1P20849 921 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 CASQ1P31415 396 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 NOP2P46087 812 aaKnown RBP7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 PTGDRQ13258 359 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 CCDC158Q5M9N0 1113 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 CNTROBQ8N137 903 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 GOLGA6L1Q8N7Z2 621 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 GOLGA5Q8TBA6 731 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 CERKQ8TCT0 537 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 PDRG1Q9NUG6 133 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 DACT1Q9NYF0 836 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 ORC3Q9UBD5 711 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 CYP46A1Q9Y6A2 500 aa7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 USP42Q9H9J4 1324 aaKnown RBP7.45□□□□□ -1.22
CALCOCO2-224ENST00000514962 ERCC6L2Q5T890 1561 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms