RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
CALCOCO2-224ENST00000514962 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
CALCOCO2-224ENST00000514962 SENP3Q9H4L4 574 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO2-224ENST00000514962 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
CALCOCO2-224ENST00000514962 FOXD1Q16676 465 aa13.98□□□□□ -0.17
CALCOCO2-224ENST00000514962 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
CALCOCO2-224ENST00000514962 ADRA2BP18089 450 aa13.21□□□□□ -0.29
CALCOCO2-224ENST00000514962 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-224ENST00000514962 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
CALCOCO2-224ENST00000514962 MSH5O43196 834 aa13.11□□□□□ -0.31
CALCOCO2-224ENST00000514962 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
CALCOCO2-224ENST00000514962 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-224ENST00000514962 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
CALCOCO2-224ENST00000514962 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO2-224ENST00000514962 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
CALCOCO2-224ENST00000514962 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.49
CALCOCO2-224ENST00000514962 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
CALCOCO2-224ENST00000514962 NCBP3Q53F19 620 aaKnown RBP11.79□□□□□ -0.52
CALCOCO2-224ENST00000514962 KCNA4P22459 653 aa11.65□□□□□ -0.54
CALCOCO2-224ENST00000514962 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
CALCOCO2-224ENST00000514962 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
CALCOCO2-224ENST00000514962 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
CALCOCO2-224ENST00000514962 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
CALCOCO2-224ENST00000514962 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
CALCOCO2-224ENST00000514962 DNAJC5BQ9UF47 199 aa11.23□□□□□ -0.61
CALCOCO2-224ENST00000514962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.622e-10■■□□□ 14.5
CALCOCO2-224ENST00000514962 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
CALCOCO2-224ENST00000514962 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-224ENST00000514962 CACNB1Q02641 598 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-224ENST00000514962 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
CALCOCO2-224ENST00000514962 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
CALCOCO2-224ENST00000514962 U3KPZ7 1027 aaPredicted RBP10.88□□□□□ -0.67
CALCOCO2-224ENST00000514962 SLC4A2P04920 1241 aa10.86□□□□□ -0.67
CALCOCO2-224ENST00000514962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
CALCOCO2-224ENST00000514962 APLP2Q06481 763 aa10.8□□□□□ -0.68
CALCOCO2-224ENST00000514962 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-224ENST00000514962 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
CALCOCO2-224ENST00000514962 ZBTB22O15209 634 aa10.73□□□□□ -0.69
CALCOCO2-224ENST00000514962 HRCP23327 699 aa10.73□□□□□ -0.69
CALCOCO2-224ENST00000514962 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.69
CALCOCO2-224ENST00000514962 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
CALCOCO2-224ENST00000514962 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
CALCOCO2-224ENST00000514962 CAPN15O75808 1086 aa10.7□□□□□ -0.7
CALCOCO2-224ENST00000514962 PELP1Q8IZL8 1130 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-224ENST00000514962 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
CALCOCO2-224ENST00000514962 ZNF219Q9P2Y4 722 aaPredicted RBP10.6□□□□□ -0.71
CALCOCO2-224ENST00000514962 TRHP20396 242 aaPredicted RBP10.57□□□□□ -0.72
CALCOCO2-224ENST00000514962 DSG3P32926 999 aa10.49□□□□□ -0.73
CALCOCO2-224ENST00000514962 ABCB7O75027 752 aa10.42□□□□□ -0.74
CALCOCO2-224ENST00000514962 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO2-224ENST00000514962 DCAF1Q9Y4B6 1507 aa10.39□□□□□ -0.75
CALCOCO2-224ENST00000514962 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
CALCOCO2-224ENST00000514962 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
CALCOCO2-224ENST00000514962 MYT1Q01538 1121 aa10.34□□□□□ -0.75
CALCOCO2-224ENST00000514962 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
CALCOCO2-224ENST00000514962 POLA2Q14181 598 aa10.3□□□□□ -0.76
CALCOCO2-224ENST00000514962 PCGF6Q9BYE7 350 aa10.3□□□□□ -0.76
CALCOCO2-224ENST00000514962 ATF5Q9Y2D1 282 aaPredicted RBP10.3□□□□□ -0.76
CALCOCO2-224ENST00000514962 CCDC180Q9P1Z9 1646 aa10.29□□□□□ -0.76
CALCOCO2-224ENST00000514962 SUPT5HO00267 1087 aaKnown RBP10.27□□□□□ -0.77
CALCOCO2-224ENST00000514962 SHROOM4Q9ULL8 1493 aa10.27□□□□□ -0.77
CALCOCO2-224ENST00000514962 PPARGC1BQ86YN6 1023 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-224ENST00000514962 ZEB1P37275 1124 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-224ENST00000514962 ZBTB12Q9Y330 459 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-224ENST00000514962 ZCCHC6Q5VYS8 1495 aaKnown RBP10.22□□□□□ -0.77
CALCOCO2-224ENST00000514962 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
CALCOCO2-224ENST00000514962 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
CALCOCO2-224ENST00000514962 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
CALCOCO2-224ENST00000514962 POTEHQ6S545 545 aa10.11□□□□□ -0.79
CALCOCO2-224ENST00000514962 FBLN2P98095 1184 aa10.08□□□□□ -0.8
CALCOCO2-224ENST00000514962 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
CALCOCO2-224ENST00000514962 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-224ENST00000514962 AKT1S1Q96B36 256 aa9.9□□□□□ -0.82
CALCOCO2-224ENST00000514962 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
CALCOCO2-224ENST00000514962 SPDYE2BA6NHP3 402 aa9.87□□□□□ -0.83
CALCOCO2-224ENST00000514962 SPDYE6P0CI01 402 aa9.87□□□□□ -0.83
CALCOCO2-224ENST00000514962 SPDYE2Q495Y8 402 aa9.87□□□□□ -0.83
CALCOCO2-224ENST00000514962 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
CALCOCO2-224ENST00000514962 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
CALCOCO2-224ENST00000514962 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
CALCOCO2-224ENST00000514962 NEUROD1Q13562 356 aa9.77□□□□□ -0.85
CALCOCO2-224ENST00000514962 ARXQ96QS3 562 aa9.77□□□□□ -0.85
CALCOCO2-224ENST00000514962 FKBP8Q14318 412 aa9.76□□□□□ -0.85
CALCOCO2-224ENST00000514962 REM2Q8IYK8 340 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO2-224ENST00000514962 ABCC9O60706 1549 aa9.75□□□□□ -0.85
CALCOCO2-224ENST00000514962 TTBK1Q5TCY1 1321 aaPredicted RBP9.75□□□□□ -0.85
CALCOCO2-224ENST00000514962 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
CALCOCO2-224ENST00000514962 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
CALCOCO2-224ENST00000514962 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.86
CALCOCO2-224ENST00000514962 PRKCSHP14314 528 aaPredicted RBP9.69□□□□□ -0.86
CALCOCO2-224ENST00000514962 BCANQ96GW7 911 aa9.69□□□□□ -0.86
CALCOCO2-224ENST00000514962 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
CALCOCO2-224ENST00000514962 SPDYE1Q8NFV5 336 aaPredicted RBP9.66□□□□□ -0.86
CALCOCO2-224ENST00000514962 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
CALCOCO2-224ENST00000514962 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
CALCOCO2-224ENST00000514962 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
CALCOCO2-224ENST00000514962 SPDYE4A6NLX3 237 aa9.62□□□□□ -0.87
CALCOCO2-224ENST00000514962 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
CALCOCO2-224ENST00000514962 CLEC11AQ9Y240 323 aa9.62□□□□□ -0.87
CALCOCO2-224ENST00000514962 CCER1Q8TC90 406 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms