RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 STOML1Q9UBI4 398 aa8.84□□□□□ -0.99
NEDD4-211ENST00000514893 LRFN2Q9ULH4 789 aa8.84□□□□□ -0.99
NEDD4-211ENST00000514893 RAXQ9Y2V3 346 aa8.84□□□□□ -0.99
NEDD4-211ENST00000514893 PPME1Q9Y570 386 aa8.84□□□□□ -0.99
NEDD4-211ENST00000514893 GLB1P16278 677 aa8.83□□□□□ -1
NEDD4-211ENST00000514893 TXKP42681 527 aa8.83□□□□□ -1
NEDD4-211ENST00000514893 SETDB1Q15047 1291 aa8.83□□□□□ -1
NEDD4-211ENST00000514893 NSUN5Q96P11 429 aaKnown RBP8.83□□□□□ -1
NEDD4-211ENST00000514893 Q6ZS46 218 aa8.82□□□□□ -1
NEDD4-211ENST00000514893 NLRP13Q86W25 1043 aa8.82□□□□□ -1
NEDD4-211ENST00000514893 KCNMB2Q9Y691 235 aa8.82□□□□□ -1
NEDD4-211ENST00000514893 DHX15O43143 795 aaKnown RBP8.81□□□□□ -1
NEDD4-211ENST00000514893 CD97P48960 835 aa8.81□□□□□ -1
NEDD4-211ENST00000514893 COX20Q5RI15 118 aa8.81□□□□□ -1
NEDD4-211ENST00000514893 COBLO75128 1261 aa8.8□□□□□ -1
NEDD4-211ENST00000514893 IGLV1-40P01703 118 aa8.8□□□□□ -1
NEDD4-211ENST00000514893 RFX1P22670 979 aa8.8□□□□□ -1
NEDD4-211ENST00000514893 BRD2P25440 801 aaKnown RBP8.8□□□□□ -1
NEDD4-211ENST00000514893 PIK3R5Q8WYR1 880 aa8.8□□□□□ -1
NEDD4-211ENST00000514893 SPACA7Q96KW9 195 aa8.8□□□□□ -1
NEDD4-211ENST00000514893 CEP41Q9BYV8 373 aa8.8□□□□□ -1
NEDD4-211ENST00000514893 FAM13BQ9NYF5 915 aa8.8□□□□□ -1
NEDD4-211ENST00000514893 IRAK1P51617 712 aa8.79□□□□□ -1
NEDD4-211ENST00000514893 TRIM33Q9UPN9 1127 aa8.79□□□□□ -1
NEDD4-211ENST00000514893 A6NJR5 290 aa8.78□□□□□ -1
NEDD4-211ENST00000514893 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
NEDD4-211ENST00000514893 HYAL2Q12891 473 aa8.78□□□□□ -1
NEDD4-211ENST00000514893 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.78□□□□□ -1
NEDD4-211ENST00000514893 AGGF1Q8N302 714 aaeCLIP8.78□□□□□ -1
NEDD4-211ENST00000514893 UBL7Q96S82 380 aaPredicted RBP8.78□□□□□ -1
NEDD4-211ENST00000514893 CD68P34810 354 aaPredicted RBP8.77□□□□□ -1.01
NEDD4-211ENST00000514893 FNDC3AQ9Y2H6 1198 aaKnown RBP8.77□□□□□ -1.01
NEDD4-211ENST00000514893 UBAP1LF5GYI3 381 aa8.76□□□□□ -1.01
NEDD4-211ENST00000514893 LINC01387J3KSC0 135 aa8.76□□□□□ -1.01
NEDD4-211ENST00000514893 SMNDC1O75940 238 aaKnown RBP eCLIP8.76□□□□□ -1.01
NEDD4-211ENST00000514893 GRIK1P39086 918 aa8.76□□□□□ -1.01
NEDD4-211ENST00000514893 TTC39BQ5VTQ0 682 aaPredicted RBP8.76□□□□□ -1.01
NEDD4-211ENST00000514893 INTS5Q6P9B9 1019 aaKnown RBP8.76□□□□□ -1.01
NEDD4-211ENST00000514893 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
NEDD4-211ENST00000514893 OR13H1Q8NG92 308 aa8.76□□□□□ -1.01
NEDD4-211ENST00000514893 CDC27P30260 824 aa8.75□□□□□ -1.01
NEDD4-211ENST00000514893 FKBP5Q13451 457 aaPredicted RBP8.75□□□□□ -1.01
NEDD4-211ENST00000514893 SWI5Q1ZZU3 235 aa8.75□□□□□ -1.01
NEDD4-211ENST00000514893 UVSSAQ2YD98 709 aa8.75□□□□□ -1.01
NEDD4-211ENST00000514893 CEP135Q66GS9 1140 aa8.75□□□□□ -1.01
NEDD4-211ENST00000514893 FAM117BQ6P1L5 589 aa8.75□□□□□ -1.01
NEDD4-211ENST00000514893 C16orf46Q6P387 395 aa8.75□□□□□ -1.01
NEDD4-211ENST00000514893 FAM177BA6PVY3 158 aa8.74□□□□□ -1.01
NEDD4-211ENST00000514893 KIAA1324LA8MWY0 1029 aaPredicted RBP8.74□□□□□ -1.01
NEDD4-211ENST00000514893 SCNN1AP37088 669 aa8.74□□□□□ -1.01
NEDD4-211ENST00000514893 ETFBKMTQ8IXQ9 262 aa8.74□□□□□ -1.01
NEDD4-211ENST00000514893 KLHL23Q8NBE8 558 aa8.74□□□□□ -1.01
NEDD4-211ENST00000514893 GALNT11Q8NCW6 608 aa8.74□□□□□ -1.01
NEDD4-211ENST00000514893 PRIMPOLQ96LW4 560 aa8.74□□□□□ -1.01
NEDD4-211ENST00000514893 FMNL2Q96PY5 1086 aa8.74□□□□□ -1.01
NEDD4-211ENST00000514893 MED26O95402 600 aa8.73□□□□□ -1.01
NEDD4-211ENST00000514893 ACAD11Q709F0 780 aa8.73□□□□□ -1.01
NEDD4-211ENST00000514893 COL26A1Q96A83 441 aa8.73□□□□□ -1.01
NEDD4-211ENST00000514893 NOVA2Q9UNW9 492 aaKnown RBP8.73□□□□□ -1.01
NEDD4-211ENST00000514893 ACIN1Q9UKV3 1341 aaKnown RBP8.73□□□□□ -1.01
NEDD4-211ENST00000514893 TGFB1P01137 390 aa8.72□□□□□ -1.01
NEDD4-211ENST00000514893 GP2P55259 537 aaKnown RBP8.72□□□□□ -1.01
NEDD4-211ENST00000514893 NFIAQ12857 509 aa8.72□□□□□ -1.01
NEDD4-211ENST00000514893 CDCA8Q53HL2 280 aa8.72□□□□□ -1.01
NEDD4-211ENST00000514893 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
NEDD4-211ENST00000514893 ARMC10Q8N2F6 343 aa8.72□□□□□ -1.01
NEDD4-211ENST00000514893 UTP4Q969X6 686 aaKnown RBP8.72□□□□□ -1.01
NEDD4-211ENST00000514893 LACRTQ9GZZ8 138 aa8.72□□□□□ -1.01
NEDD4-211ENST00000514893 TAL1P17542 331 aaPredicted RBP8.71□□□□□ -1.02
NEDD4-211ENST00000514893 TRIP4Q15650 581 aaPredicted RBP8.71□□□□□ -1.02
NEDD4-211ENST00000514893 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.02
NEDD4-211ENST00000514893 RNF43Q68DV7 783 aa8.71□□□□□ -1.02
NEDD4-211ENST00000514893 ZDHHC13Q8IUH4 622 aa8.71□□□□□ -1.02
NEDD4-211ENST00000514893 KRTAP9-9Q9BYP9 154 aa8.71□□□□□ -1.02
NEDD4-211ENST00000514893 KRTAP9-4Q9BYQ2 154 aa8.71□□□□□ -1.02
NEDD4-211ENST00000514893 SAP130Q9H0E3 1048 aa8.71□□□□□ -1.02
NEDD4-211ENST00000514893 OAS3Q9Y6K5 1087 aaKnown RBP8.71□□□□□ -1.02
NEDD4-211ENST00000514893 FSCN2O14926 492 aa8.7□□□□□ -1.02
NEDD4-211ENST00000514893 PRMT3O60678 531 aa8.7□□□□□ -1.02
NEDD4-211ENST00000514893 YBX3P16989 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
NEDD4-211ENST00000514893 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
NEDD4-211ENST00000514893 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
NEDD4-211ENST00000514893 WISP1O95388 367 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 CDC25BP30305 580 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 ATP11AP98196 1134 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
NEDD4-211ENST00000514893 TXNDC11Q6PKC3 985 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 CLEC10AQ8IUN9 316 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 TRIM42Q8IWZ5 723 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 MYRFLQ96LU7 910 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 PBX4Q9BYU1 374 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 KCNK4Q9NYG8 393 aa8.69□□□□□ -1.02
NEDD4-211ENST00000514893 SART1O43290 800 aaKnown RBP8.68□□□□□ -1.02
NEDD4-211ENST00000514893 PTPRAP18433 802 aa8.68□□□□□ -1.02
NEDD4-211ENST00000514893 KIAA1211Q6ZU35 1233 aa8.68□□□□□ -1.02
NEDD4-211ENST00000514893 NCAPG2Q86XI2 1143 aa8.68□□□□□ -1.02
NEDD4-211ENST00000514893 RASSF4Q9H2L5 321 aa8.68□□□□□ -1.02
NEDD4-211ENST00000514893 SEC31BQ9NQW1 1179 aa8.68□□□□□ -1.02
NEDD4-211ENST00000514893 ABI2Q9NYB9 513 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms