RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 DNAI1Q9UI46 699 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 PTPRMP28827 1452 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 PES1O00541 588 aaKnown RBP16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 GPS2Q13227 327 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 ZNF397Q8NF99 534 aaPredicted RBP16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 KIF2AO00139 706 aaPredicted RBP16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 GSDMDP57764 484 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 CABP4P57796 275 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 ARID5BQ14865 1188 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 SPTLC3Q9NUV7 552 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 PREX1Q8TCU6 1659 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 PTPDC1A2A3K4 754 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 DHX16O60231 1041 aaKnown RBP16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 GTF2F1P35269 517 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■■■□□ 16.7
TSPAN17-208ENST00000514705 SUCLG2Q96I99 432 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 SBNO1A3KN83 1393 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 LINS1Q8NG48 757 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 IFNKQ9P0W0 207 aa16.17■□□□□ 0.18
TSPAN17-208ENST00000514705 NEXMIFQ5QGS0 1516 aa16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 GTF3C6Q969F1 213 aa16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 ZNF335Q9H4Z2 1342 aaPredicted RBP16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 TLR7Q9NYK1 1049 aaKnown RBP16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 MROH1Q8NDA8 1641 aa16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 A0A087WZG4 1122 aa16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 EIF4A1P60842 406 aaKnown RBP16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 OTUD7BQ6GQQ9 843 aa16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.184e-8■■■■■ 31.1
TSPAN17-208ENST00000514705 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 LRRFIP1Q32MZ4 808 aaKnown RBP16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 NGLY1Q96IV0 654 aa16.16■□□□□ 0.18
TSPAN17-208ENST00000514705 COPS6Q7L5N1 327 aa16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 AP5Z1O43299 807 aa16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 MRPS27Q92552 414 aaKnown RBP16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 CD163L1Q9NR16 1453 aa16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 ARHGEF10O15013 1369 aa16.15■□□□□ 0.18
TSPAN17-208ENST00000514705 NCBP1Q09161 790 aaKnown RBP16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 MCMDC2Q4G0Z9 681 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 MAP4K1Q92918 833 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 MARCKSP29966 332 aaPredicted RBP16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 TFCP2Q12800 502 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 BMS1Q14692 1282 aaKnown RBP16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 TAF3Q5VWG9 929 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 ORC3Q9UBD5 711 aaPredicted RBP16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 CCP110O43303 1012 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 ARHGAP29Q52LW3 1261 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 UTP14CQ5TAP6 766 aaKnown RBP16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 LRRC8AQ8IWT6 810 aa16.14■□□□□ 0.17
TSPAN17-208ENST00000514705 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 IFIT1P09914 478 aaKnown RBP16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 NECTIN1Q15223 517 aa16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 SKIDA1Q1XH10 827 aa16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 PROSER3Q2NL68 480 aa16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 ZNF589Q86UQ0 364 aaPredicted RBP16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 POLA2Q14181 598 aa16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 C11orf57Q6ZUT1 292 aaPredicted RBP16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 IP6K1Q92551 441 aa16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 CCDC34Q96HJ3 373 aa16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 TOP1P11387 765 aaKnown RBP16.13■□□□□ 0.17
TSPAN17-208ENST00000514705 RIMS1Q86UR5 1692 aaKnown RBP16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 REREQ9P2R6 1566 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 BBXQ8WY36 941 aaPredicted RBP16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 USP28Q96RU2 1077 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 PRDM4Q9UKN5 801 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 FAM160A1Q05DH4 1040 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 NBPF6Q5VWK0 638 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 GOLGA6L1Q8N7Z2 621 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 NBPF4Q96M43 638 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 DBNDD2Q9BQY9 259 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 JMYQ8N9B5 988 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 ERO1AQ96HE7 468 aa16.12■□□□□ 0.17
TSPAN17-208ENST00000514705 CCDC144BQ3MJ40 725 aa16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 MYO3AQ8NEV4 1616 aa16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 ERCC6LQ2NKX8 1250 aa16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 CCDC158Q5M9N0 1113 aa16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
TSPAN17-208ENST00000514705 CBFA2T2O43439 604 aa16.1■□□□□ 0.17
TSPAN17-208ENST00000514705 UBASH3AP57075 661 aa16.1■□□□□ 0.17
TSPAN17-208ENST00000514705 IMMTQ16891 758 aaKnown RBP16.1■□□□□ 0.17
TSPAN17-208ENST00000514705 ANKRD13DQ6ZTN6 518 aa16.1■□□□□ 0.17
TSPAN17-208ENST00000514705 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
TSPAN17-208ENST00000514705 CEP126Q9P2H0 1117 aa16.1■□□□□ 0.17
TSPAN17-208ENST00000514705 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms