RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 NEDD1Q8NHV4 660 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 WHAMMQ8TF30 809 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 KLRG1Q96E93 195 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 CRELD1Q96HD1 420 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 INPP5FQ9Y2H2 1132 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 OPLAHO14841 1288 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 BNIP3LO60238 219 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 MICAL2O94851 1124 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 RPLP1P05386 114 aaKnown RBP5.82□□□□□ -1.48
SGCB-203ENST00000514133 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.82□□□□□ -1.48
SGCB-203ENST00000514133 RHPN1Q8TCX5 695 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 ZIC5Q96T25 663 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 DNAJC25Q9H1X3 360 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 EFCC1Q9HA90 598 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 NEUROD4Q9HD90 331 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 NLRP2Q9NX02 1062 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 BCS1LQ9Y276 419 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 PCDHGB7Q9Y5F8 929 aa5.82□□□□□ -1.48
SGCB-203ENST00000514133 PPM1GO15355 546 aaPredicted RBP5.81□□□□□ -1.48
SGCB-203ENST00000514133 GSK3AP49840 483 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 TNP2Q05952 138 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 GIMAP6Q6P9H5 292 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 BICDL1Q6ZP65 573 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 HS2ST1Q7LGA3 356 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 USP48Q86UV5 1035 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 ZNF654Q8IZM8 581 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 LNPKQ9C0E8 428 aa5.81□□□□□ -1.48
SGCB-203ENST00000514133 DDX41Q9UJV9 622 aaKnown RBP5.81□□□□□ -1.48
SGCB-203ENST00000514133 CADPSQ9ULU8 1353 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 ADH6P28332 368 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 RACK1P63244 317 aaKnown RBP5.8□□□□□ -1.48
SGCB-203ENST00000514133 ARID5AQ03989 594 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 USPL1Q5W0Q7 1092 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 PI16Q6UXB8 463 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 PMFBP1Q8TBY8 1022 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 EPS8L3Q8TE67 593 aaKnown RBP5.8□□□□□ -1.48
SGCB-203ENST00000514133 ABHD17AQ96GS6 310 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 GGT7Q9UJ14 662 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 FOXD3Q9UJU5 478 aaPredicted RBP5.8□□□□□ -1.48
SGCB-203ENST00000514133 MKL2Q9ULH7 1088 aa5.8□□□□□ -1.48
SGCB-203ENST00000514133 EFSO43281 561 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 TNFRSF21O75509 655 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 MAPTP10636 758 aaKnown RBP5.79□□□□□ -1.48
SGCB-203ENST00000514133 NEUROD1Q13562 356 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 ZNF438Q7Z4V0 828 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 VPS37DQ86XT2 251 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 CMTR1Q8N1G2 835 aaKnown RBP5.79□□□□□ -1.48
SGCB-203ENST00000514133 GALNT6Q8NCL4 622 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 EDARADDQ8WWZ3 215 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 CCDC74AQ96AQ1 378 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 OSBPL7Q9BZF2 842 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 C12orf49Q9H741 205 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 MARK1Q9P0L2 795 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 USP20Q9Y2K6 914 aa5.79□□□□□ -1.48
SGCB-203ENST00000514133 TGFBR3LH3BV60 316 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 EPXP11678 715 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 IRS1P35568 1242 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 IDH3AP50213 366 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 TAF1CQ15572 869 aaPredicted RBP5.78□□□□□ -1.48
SGCB-203ENST00000514133 CCDC144BQ3MJ40 725 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 ZNF280CQ8ND82 737 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 SUSD3Q96L08 255 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 GMLQ99445 158 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 C11orf16Q9NQ32 467 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 FNDC3AQ9Y2H6 1198 aaKnown RBP5.78□□□□□ -1.48
SGCB-203ENST00000514133 USP31Q70CQ4 1352 aa5.78□□□□□ -1.48
SGCB-203ENST00000514133 GIPC1O14908 333 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 KHNYNO15037 678 aaKnown RBP5.77□□□□□ -1.49
SGCB-203ENST00000514133 KCNQ4P56696 695 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 CTBSQ01459 385 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 MEI1Q5TIA1 1274 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 ZNF468Q5VIY5 522 aaPredicted RBP5.77□□□□□ -1.49
SGCB-203ENST00000514133 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
SGCB-203ENST00000514133 SNX29Q8TEQ0 813 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 C7orf43Q8WVR3 580 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 ARMC5Q96C12 935 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 HSH2DQ96JZ2 352 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 SRA1Q9HD15 236 aaKnown RBP5.77□□□□□ -1.49
SGCB-203ENST00000514133 NOP53Q9NZM5 478 aaKnown RBP5.77□□□□□ -1.49
SGCB-203ENST00000514133 FAM8A1Q9UBU6 413 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 GGA1Q9UJY5 639 aa5.77□□□□□ -1.49
SGCB-203ENST00000514133 UBAP1LF5GYI3 381 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 C2CD2LO14523 706 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 PHACTR2O75167 634 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 POLR3DP05423 398 aaPredicted RBP5.76□□□□□ -1.49
SGCB-203ENST00000514133 USP17L7P0C7H9 530 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 NCLP19338 710 aaKnown RBP5.76□□□□□ -1.49
SGCB-203ENST00000514133 PTPN12Q05209 780 aaKnown RBP5.76□□□□□ -1.49
SGCB-203ENST00000514133 IER5Q5VY09 327 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 ZFYVE28Q9HCC9 887 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 NPHS2Q9NP85 383 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 PRR12Q9ULL5 1215 aa5.76□□□□□ -1.49
SGCB-203ENST00000514133 RTCBQ9Y3I0 505 aaKnown RBP5.76□□□□□ -1.49
SGCB-203ENST00000514133 GNB5O14775 395 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 SIN3BO75182 1162 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 GADD45BO75293 160 aaPredicted RBP5.75□□□□□ -1.49
SGCB-203ENST00000514133 ALAS2P22557 587 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 ARSDP51689 593 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 PDE12Q6L8Q7 609 aaKnown RBP5.75□□□□□ -1.49
SGCB-203ENST00000514133 NXPE4Q6UWF7 544 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms