RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 BRCA2P51587 3418 aa11.3□□□□□ -0.6
CAST-240ENST00000514055 BBOX1O75936 387 aa11.29□□□□□ -0.6
CAST-240ENST00000514055 CALD1Q05682 793 aaKnown RBP11.29□□□□□ -0.6
CAST-240ENST00000514055 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
CAST-240ENST00000514055 DOK7Q18PE1 504 aa11.29□□□□□ -0.6
CAST-240ENST00000514055 KIF4BQ2VIQ3 1234 aa11.29□□□□□ -0.6
CAST-240ENST00000514055 SLC10A5Q5PT55 438 aa11.29□□□□□ -0.6
CAST-240ENST00000514055 TSPYL4Q9UJ04 414 aa11.29□□□□□ -0.6
CAST-240ENST00000514055 HTTP42858 3142 aa11.29□□□□□ -0.6
CAST-240ENST00000514055 TAF1P21675 1872 aa11.28□□□□□ -0.6
CAST-240ENST00000514055 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
CAST-240ENST00000514055 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
CAST-240ENST00000514055 GIGYF2Q6Y7W6 1299 aaKnown RBP11.28□□□□□ -0.6
CAST-240ENST00000514055 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
CAST-240ENST00000514055 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
CAST-240ENST00000514055 UTP14AQ9BVJ6 771 aaKnown RBP11.28□□□□□ -0.6
CAST-240ENST00000514055 BABAM1Q9NWV8 329 aa11.28□□□□□ -0.6
CAST-240ENST00000514055 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
CAST-240ENST00000514055 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
CAST-240ENST00000514055 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.61
CAST-240ENST00000514055 GRAPQ13588 217 aa11.27□□□□□ -0.61
CAST-240ENST00000514055 ANGEL2Q5VTE6 544 aaKnown RBP11.27□□□□□ -0.61
CAST-240ENST00000514055 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
CAST-240ENST00000514055 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
CAST-240ENST00000514055 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
CAST-240ENST00000514055 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
CAST-240ENST00000514055 CENPFP49454 3210 aa11.27□□□□□ -0.61
CAST-240ENST00000514055 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
CAST-240ENST00000514055 CHL1O00533 1208 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 ECE2O60344 883 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 SCARF1Q14162 830 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 WASHC4Q2M389 1173 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
CAST-240ENST00000514055 IFT57Q9NWB7 429 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 POLLQ9UGP5 575 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 COL4A1P02462 1669 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 LAMB2P55268 1798 aa11.26□□□□□ -0.61
CAST-240ENST00000514055 FKTNO75072 461 aa11.25□□□□□ -0.61
CAST-240ENST00000514055 ANXA1P04083 346 aa11.25□□□□□ -0.61
CAST-240ENST00000514055 EN2P19622 333 aaPredicted RBP11.25□□□□□ -0.61
CAST-240ENST00000514055 RPS12P25398 132 aaKnown RBP11.25□□□□□ -0.61
CAST-240ENST00000514055 EIF4A1P60842 406 aaKnown RBP11.25□□□□□ -0.61
CAST-240ENST00000514055 GNAI1P63096 354 aa11.25□□□□□ -0.61
CAST-240ENST00000514055 GPSM2P81274 684 aa11.25□□□□□ -0.61
CAST-240ENST00000514055 PARP10Q53GL7 1025 aa11.25□□□□□ -0.61
CAST-240ENST00000514055 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
CAST-240ENST00000514055 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
CAST-240ENST00000514055 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
CAST-240ENST00000514055 TM4SF4P48230 202 aa11.24□□□□□ -0.61
CAST-240ENST00000514055 PROSER3Q2NL68 480 aa11.24□□□□□ -0.61
CAST-240ENST00000514055 LRP10Q7Z4F1 713 aa11.24□□□□□ -0.61
CAST-240ENST00000514055 CELF1Q92879 486 aaKnown RBP11.24□□□□□ -0.61
CAST-240ENST00000514055 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
CAST-240ENST00000514055 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
CAST-240ENST00000514055 SCN9AQ15858 1988 aa11.24□□□□□ -0.61
CAST-240ENST00000514055 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
CAST-240ENST00000514055 DLL1O00548 723 aa11.23□□□□□ -0.61
CAST-240ENST00000514055 VIL1P09327 827 aaKnown RBP11.23□□□□□ -0.61
CAST-240ENST00000514055 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
CAST-240ENST00000514055 PDIA6Q15084 440 aa11.23□□□□□ -0.61
CAST-240ENST00000514055 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
CAST-240ENST00000514055 IL16Q14005 1332 aa11.23□□□□□ -0.61
CAST-240ENST00000514055 FKBP1BP68106 108 aa11.22□□□□□ -0.61
CAST-240ENST00000514055 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
CAST-240ENST00000514055 OTOP1Q7RTM1 612 aa11.22□□□□□ -0.61
CAST-240ENST00000514055 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
CAST-240ENST00000514055 ANKRD36CQ5JPF3 1778 aa11.21□□□□□ -0.61
CAST-240ENST00000514055 LRRC37AA6NMS7 1700 aa11.21□□□□□ -0.61
CAST-240ENST00000514055 RANBP2P49792 3224 aaKnown RBP11.21□□□□□ -0.61
CAST-240ENST00000514055 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.61
CAST-240ENST00000514055 CAP1Q01518 475 aa11.21□□□□□ -0.61
CAST-240ENST00000514055 TTLL12Q14166 644 aaPredicted RBP11.21□□□□□ -0.61
CAST-240ENST00000514055 KRT24Q2M2I5 525 aa11.21□□□□□ -0.61
CAST-240ENST00000514055 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.61
CAST-240ENST00000514055 TSR2Q969E8 191 aaKnown RBP11.21□□□□□ -0.61
CAST-240ENST00000514055 TRMT112Q9UI30 125 aaKnown RBP11.21□□□□□ -0.61
CAST-240ENST00000514055 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
CAST-240ENST00000514055 EIF2S2P20042 333 aaKnown RBP11.2□□□□□ -0.62
CAST-240ENST00000514055 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
CAST-240ENST00000514055 PRKG1Q13976 671 aa11.2□□□□□ -0.62
CAST-240ENST00000514055 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
CAST-240ENST00000514055 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
CAST-240ENST00000514055 FZD1Q9UP38 647 aa11.2□□□□□ -0.62
CAST-240ENST00000514055 A0A0C4DFX4 3053 aa11.2□□□□□ -0.62
CAST-240ENST00000514055 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
CAST-240ENST00000514055 FANCIQ9NVI1 1328 aa11.19□□□□□ -0.62
CAST-240ENST00000514055 H0YGN5 161 aa11.19□□□□□ -0.62
CAST-240ENST00000514055 HOXB7P09629 217 aa11.19□□□□□ -0.62
CAST-240ENST00000514055 AIMP1Q12904 312 aaKnown RBP11.19□□□□□ -0.62
CAST-240ENST00000514055 NBPF9Q3BBW0 867 aa11.19□□□□□ -0.62
CAST-240ENST00000514055 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
CAST-240ENST00000514055 MYOZ2Q9NPC6 264 aa11.19□□□□□ -0.62
CAST-240ENST00000514055 ERBB4Q15303 1308 aa11.18□□□□□ -0.62
CAST-240ENST00000514055 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
CAST-240ENST00000514055 SREBF2Q12772 1141 aa11.18□□□□□ -0.62
CAST-240ENST00000514055 DUSP27Q5VZP5 1158 aa11.18□□□□□ -0.62
CAST-240ENST00000514055 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
CAST-240ENST00000514055 TMC4Q7Z404 712 aa11.18□□□□□ -0.62
CAST-240ENST00000514055 CD99L2Q8TCZ2 262 aa11.18□□□□□ -0.62
CAST-240ENST00000514055 XAGE3Q8WTP9 111 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms