RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.42□□□□□ -0.74
NEK1-207ENST00000511633 DCTPP1Q9H773 170 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
NEK1-207ENST00000511633 TAX1BP1Q86VP1 789 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 FAM89AQ96GI7 184 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 VEZTQ9HBM0 779 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 TTC41PQ6P2S7 1318 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 ZSCAN12O43309 604 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 CCDC40Q4G0X9 1142 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 ZNF790Q6PG37 636 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 ZC3H12CQ9C0D7 883 aaKnown RBP10.42□□□□□ -0.74
NEK1-207ENST00000511633 ZSCAN16Q9H4T2 348 aaPredicted RBP10.42□□□□□ -0.74
NEK1-207ENST00000511633 SBNO1A3KN83 1393 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 EDC4Q6P2E9 1401 aaKnown RBP10.42□□□□□ -0.74
NEK1-207ENST00000511633 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
NEK1-207ENST00000511633 PTPN14Q15678 1187 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 ZBTB40Q9NUA8 1239 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 CNPY2Q9Y2B0 182 aa10.42□□□□□ -0.74
NEK1-207ENST00000511633 UBE2HP62256 183 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 RBM26Q5T8P6 1007 aaKnown RBP10.41□□□□□ -0.74
NEK1-207ENST00000511633 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 TMTC2Q8N394 836 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
NEK1-207ENST00000511633 LEKR1Q6ZMV7 388 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 TMC6Q7Z403 805 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 VPS36Q86VN1 386 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 TSPYL1Q9H0U9 437 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 LGR6Q9HBX8 967 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 DDX21Q9NR30 783 aaKnown RBP eCLIP10.41□□□□□ -0.74
NEK1-207ENST00000511633 MCM9Q9NXL9 1143 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 CEP170Q5SW79 1584 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 CWC15Q9P013 229 aaKnown RBP10.41□□□□□ -0.74
NEK1-207ENST00000511633 ABCA5Q8WWZ7 1642 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 KIF5CO60282 957 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 TRAPPC3LQ5T215 181 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 SYCP3Q8IZU3 236 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 SOS1Q07889 1333 aaPredicted RBP10.41□□□□□ -0.74
NEK1-207ENST00000511633 CASQ1P31415 396 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 CCDC178Q5BJE1 867 aa10.41□□□□□ -0.74
NEK1-207ENST00000511633 TRMT1Q9NXH9 659 aaKnown RBP10.41□□□□□ -0.74
NEK1-207ENST00000511633 YEATS4O95619 227 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 NBPF7P0C2Y1 421 aaPredicted RBP10.4□□□□□ -0.74
NEK1-207ENST00000511633 AFMP43652 599 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 CCDC150Q8NCX0 1101 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 EIF3JO75822 258 aaKnown RBP10.4□□□□□ -0.74
NEK1-207ENST00000511633 USP8P40818 1118 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 TAF3Q5VWG9 929 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 GIMAP6Q6P9H5 292 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 UBXN4Q92575 508 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 SYKP43405 635 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 NAPAP54920 295 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 ANAPC15P60006 121 aa10.4□□□□□ -0.74
NEK1-207ENST00000511633 KIF4BQ2VIQ3 1234 aa10.4□□□□□ -0.75
NEK1-207ENST00000511633 PLEKHM2Q8IWE5 1019 aa10.4□□□□□ -0.75
NEK1-207ENST00000511633 CCNL1Q9UK58 526 aaPredicted RBP10.4□□□□□ -0.75
NEK1-207ENST00000511633 TNNT1P13805 278 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 HCLS1P14317 486 aaPredicted RBP10.39□□□□□ -0.75
NEK1-207ENST00000511633 ZNF165P49910 485 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 APOBRQ0VD83 1088 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 KANK3Q6NY19 840 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 ANKRD2Q9GZV1 360 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 URI1O94763 535 aaPredicted RBP10.39□□□□□ -0.75
NEK1-207ENST00000511633 LDHBP07195 334 aaKnown RBP10.39□□□□□ -0.75
NEK1-207ENST00000511633 GNAT2P19087 354 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 MARCKSP29966 332 aaPredicted RBP10.39□□□□□ -0.75
NEK1-207ENST00000511633 CREB3L3Q68CJ9 461 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 PLBD2Q8NHP8 589 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 MMRN2Q9H8L6 949 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 EXOC1Q9NV70 894 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 ADCY5O95622 1261 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 KLHDC4Q8TBB5 520 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 PYM1Q9BRP8 204 aaKnown RBP10.39□□□□□ -0.75
NEK1-207ENST00000511633 KAT6BQ8WYB5 2073 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 TBCAO75347 108 aaKnown RBP10.39□□□□□ -0.75
NEK1-207ENST00000511633 ITGA6P23229 1130 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 CETN2P41208 172 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 C8orf34Q49A92 452 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 DNAI2Q9GZS0 605 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
NEK1-207ENST00000511633 RXRAP19793 462 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 GRM1Q13255 1194 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 POLD1P28340 1107 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 STAT6P42226 847 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 AK2P54819 239 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 FAM98CQ17RN3 349 aaKnown RBP10.38□□□□□ -0.75
NEK1-207ENST00000511633 ZSCAN23Q3MJ62 389 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 USP48Q86UV5 1035 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 CNBD1Q8NA66 436 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 RBM17Q96I25 401 aaKnown RBP10.38□□□□□ -0.75
NEK1-207ENST00000511633 ADGRL2O95490 1459 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 A1BGP04217 495 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 CETN1Q12798 172 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 RRAGBQ5VZM2 374 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 TRIM47Q96LD4 638 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 METTL22Q9BUU2 404 aaPredicted RBP10.38□□□□□ -0.75
NEK1-207ENST00000511633 SLC52A2Q9HAB3 445 aa10.38□□□□□ -0.75
NEK1-207ENST00000511633 ZBTB7BO15156 539 aaPredicted RBP10.38□□□□□ -0.75
NEK1-207ENST00000511633 GNAQP50148 359 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms