RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 C2CD5Q86YS7 1000 aa9.07□□□□□ -0.96
CLCN3-207ENST00000511092 FAM161BQ96MY7 647 aa9.07□□□□□ -0.96
CLCN3-207ENST00000511092 STAP2Q9UGK3 403 aa9.07□□□□□ -0.96
CLCN3-207ENST00000511092 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
CLCN3-207ENST00000511092 GPR25O00155 361 aa9.06□□□□□ -0.96
CLCN3-207ENST00000511092 SIK1P57059 783 aa9.06□□□□□ -0.96
CLCN3-207ENST00000511092 RGMBQ6NW40 437 aa9.06□□□□□ -0.96
CLCN3-207ENST00000511092 TRAK1Q9UPV9 953 aa9.06□□□□□ -0.96
CLCN3-207ENST00000511092 IRS2Q9Y4H2 1338 aa9.05□□□□□ -0.96
CLCN3-207ENST00000511092 PLEKHG3A1L390 1219 aa9.05□□□□□ -0.96
CLCN3-207ENST00000511092 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
CLCN3-207ENST00000511092 MAFAQ8NHW3 353 aaPredicted RBP9.05□□□□□ -0.96
CLCN3-207ENST00000511092 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
CLCN3-207ENST00000511092 ANKRD24Q8TF21 1146 aa9.05□□□□□ -0.96
CLCN3-207ENST00000511092 R3HDMLQ9H3Y0 253 aa9.05□□□□□ -0.96
CLCN3-207ENST00000511092 TMEM134Q9H6X4 195 aa9.05□□□□□ -0.96
CLCN3-207ENST00000511092 C14orf93Q9H972 538 aaKnown RBP9.05□□□□□ -0.96
CLCN3-207ENST00000511092 RTCBQ9Y3I0 505 aaKnown RBP9.05□□□□□ -0.96
CLCN3-207ENST00000511092 RFC4P35249 363 aa9.04□□□□□ -0.96
CLCN3-207ENST00000511092 ITGAEP38570 1179 aa9.04□□□□□ -0.96
CLCN3-207ENST00000511092 RGL3Q3MIN7 710 aa9.04□□□□□ -0.96
CLCN3-207ENST00000511092 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLCN3-207ENST00000511092 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
CLCN3-207ENST00000511092 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
CLCN3-207ENST00000511092 MTRQ99707 1265 aa9.04□□□□□ -0.96
CLCN3-207ENST00000511092 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
CLCN3-207ENST00000511092 TRIM17Q9Y577 477 aa9.04□□□□□ -0.96
CLCN3-207ENST00000511092 TCF20Q9UGU0 1960 aaKnown RBP9.03□□□□□ -0.96
CLCN3-207ENST00000511092 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
CLCN3-207ENST00000511092 SLC10A3P09131 477 aa9.03□□□□□ -0.96
CLCN3-207ENST00000511092 SCNN1DP51172 638 aa9.03□□□□□ -0.96
CLCN3-207ENST00000511092 OTOP1Q7RTM1 612 aa9.03□□□□□ -0.96
CLCN3-207ENST00000511092 DACH1Q9UI36 760 aa9.03□□□□□ -0.96
CLCN3-207ENST00000511092 KDM3BQ7LBC6 1761 aa9.02□□□□□ -0.97
CLCN3-207ENST00000511092 ZNF157P51786 506 aaPredicted RBP9.02□□□□□ -0.97
CLCN3-207ENST00000511092 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
CLCN3-207ENST00000511092 LRFN3Q9BTN0 628 aa9.02□□□□□ -0.97
CLCN3-207ENST00000511092 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
CLCN3-207ENST00000511092 ZNF277Q9NRM2 450 aaPredicted RBP9.02□□□□□ -0.97
CLCN3-207ENST00000511092 LAMB2P55268 1798 aa9.01□□□□□ -0.97
CLCN3-207ENST00000511092 HMGB2P26583 209 aaKnown RBP9.01□□□□□ -0.97
CLCN3-207ENST00000511092 SMARCC1Q92922 1105 aaPredicted RBP9.01□□□□□ -0.97
CLCN3-207ENST00000511092 CDK19Q9BWU1 502 aa9.01□□□□□ -0.97
CLCN3-207ENST00000511092 IGSF5Q9NSI5 407 aa9.01□□□□□ -0.97
CLCN3-207ENST00000511092 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
CLCN3-207ENST00000511092 CHD6Q8TD26 2715 aa9.01□□□□□ -0.97
CLCN3-207ENST00000511092 TTC21AQ8NDW8 1320 aa9.01□□□□□ -0.97
CLCN3-207ENST00000511092 FKTNO75072 461 aa9□□□□□ -0.97
CLCN3-207ENST00000511092 ATP6V1AP38606 617 aa9□□□□□ -0.97
CLCN3-207ENST00000511092 PPARGC1BQ86YN6 1023 aaKnown RBP9□□□□□ -0.97
CLCN3-207ENST00000511092 GPC2Q8N158 579 aa9□□□□□ -0.97
CLCN3-207ENST00000511092 ZNF622Q969S3 477 aaKnown RBP eCLIP9□□□□□ -0.97
CLCN3-207ENST00000511092 SHISA4Q96DD7 197 aa9□□□□□ -0.97
CLCN3-207ENST00000511092 ZNF831Q5JPB2 1677 aa9□□□□□ -0.97
CLCN3-207ENST00000511092 WDFY4Q6ZS81 3184 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 TM4SF1P30408 202 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 PIGBQ92521 554 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 CCDC102AQ96A19 550 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 ZNF333Q96JL9 665 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 IRX2Q9BZI1 471 aaPredicted RBP8.99□□□□□ -0.97
CLCN3-207ENST00000511092 CFAP47Q6ZTR5 3102 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 USP42Q9H9J4 1324 aaKnown RBP8.99□□□□□ -0.97
CLCN3-207ENST00000511092 KDRP35968 1356 aa8.99□□□□□ -0.97
CLCN3-207ENST00000511092 ZSWIM8A7E2V4 1837 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 SMG6Q86US8 1419 aaKnown RBP8.98□□□□□ -0.97
CLCN3-207ENST00000511092 USP34Q70CQ2 3546 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 H0YIN7 160 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 FZD9O00144 591 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-207ENST00000511092 CAP1Q01518 475 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 COL9A2Q14055 689 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-207ENST00000511092 LRIT3Q3SXY7 679 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 USP50Q70EL3 339 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-207ENST00000511092 RASAL3Q86YV0 1011 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 KCNH5Q8NCM2 988 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 C5orf42Q9H799 3197 aa8.98□□□□□ -0.97
CLCN3-207ENST00000511092 ANKRD11Q6UB99 2663 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-207ENST00000511092 ZNF609O15014 1411 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 MRC1P22897 1456 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 SLC4A8Q2Y0W8 1093 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 NLRP7Q8WX94 980 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 SLC4A9Q96Q91 983 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 ASAP1Q9ULH1 1129 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 PTPN22Q9Y2R2 807 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 TRANK1O15050 2925 aa8.97□□□□□ -0.97
CLCN3-207ENST00000511092 IRF6O14896 467 aa8.96□□□□□ -0.98
CLCN3-207ENST00000511092 KMT5BQ4FZB7 885 aa8.96□□□□□ -0.98
CLCN3-207ENST00000511092 OLFM4Q6UX06 510 aa8.96□□□□□ -0.98
CLCN3-207ENST00000511092 USP38Q8NB14 1042 aa8.96□□□□□ -0.98
CLCN3-207ENST00000511092 TRPM4Q8TD43 1214 aa8.96□□□□□ -0.98
CLCN3-207ENST00000511092 LTV1Q96GA3 475 aaPredicted RBP8.96□□□□□ -0.98
CLCN3-207ENST00000511092 C1QTNF1Q9BXJ1 281 aa8.96□□□□□ -0.98
CLCN3-207ENST00000511092 DAXXQ9UER7 740 aaPredicted RBP8.96□□□□□ -0.98
CLCN3-207ENST00000511092 TJP1Q07157 1748 aa8.95□□□□□ -0.98
CLCN3-207ENST00000511092 RPS6KA4O75676 772 aa8.95□□□□□ -0.98
CLCN3-207ENST00000511092 NOM1Q5C9Z4 860 aaKnown RBP8.95□□□□□ -0.98
CLCN3-207ENST00000511092 ADAMTS19Q8TE59 1207 aa8.95□□□□□ -0.98
CLCN3-207ENST00000511092 ZNF516Q92618 1163 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms