RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 FBXO46Q6PJ61 603 aaPredicted RBP17.38■□□□□ 0.37
SGCA-206ENST00000508382 MPNDQ8N594 471 aa17.38■□□□□ 0.37
SGCA-206ENST00000508382 DPF2Q92785 391 aa17.38■□□□□ 0.37
SGCA-206ENST00000508382 HDAC9Q9UKV0 1011 aa17.38■□□□□ 0.37
SGCA-206ENST00000508382 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
SGCA-206ENST00000508382 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
SGCA-206ENST00000508382 CDCA5Q96FF9 252 aa17.37■□□□□ 0.37
SGCA-206ENST00000508382 ZBTB3Q9H5J0 574 aa17.37■□□□□ 0.37
SGCA-206ENST00000508382 KCNQ5Q9NR82 932 aa17.37■□□□□ 0.37
SGCA-206ENST00000508382 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
SGCA-206ENST00000508382 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
SGCA-206ENST00000508382 R3HDMLQ9H3Y0 253 aa17.36■□□□□ 0.37
SGCA-206ENST00000508382 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
SGCA-206ENST00000508382 TRIOBPQ9H2D6 2365 aa17.35■□□□□ 0.37
SGCA-206ENST00000508382 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
SGCA-206ENST00000508382 MOB2Q70IA6 237 aa17.35■□□□□ 0.37
SGCA-206ENST00000508382 DCPSQ96C86 337 aaKnown RBP17.35■□□□□ 0.37
SGCA-206ENST00000508382 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
SGCA-206ENST00000508382 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
SGCA-206ENST00000508382 GPR25O00155 361 aa17.34■□□□□ 0.37
SGCA-206ENST00000508382 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
SGCA-206ENST00000508382 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
SGCA-206ENST00000508382 REM2Q8IYK8 340 aaPredicted RBP17.34■□□□□ 0.37
SGCA-206ENST00000508382 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
SGCA-206ENST00000508382 DBNDD1Q9H9R9 158 aa17.34■□□□□ 0.37
SGCA-206ENST00000508382 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
SGCA-206ENST00000508382 CEP290O15078 2479 aa17.33■□□□□ 0.37
SGCA-206ENST00000508382 IRX6P78412 446 aaPredicted RBP17.33■□□□□ 0.36
SGCA-206ENST00000508382 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
SGCA-206ENST00000508382 PSME4Q14997 1843 aa17.33■□□□□ 0.36
SGCA-206ENST00000508382 BBOX1O75936 387 aa17.32■□□□□ 0.36
SGCA-206ENST00000508382 RIPK4P57078 832 aa17.32■□□□□ 0.36
SGCA-206ENST00000508382 TMX4Q9H1E5 349 aaPredicted RBP17.32■□□□□ 0.36
SGCA-206ENST00000508382 MYL6BP14649 208 aa17.31■□□□□ 0.36
SGCA-206ENST00000508382 KIF4BQ2VIQ3 1234 aa17.31■□□□□ 0.36
SGCA-206ENST00000508382 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
SGCA-206ENST00000508382 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
SGCA-206ENST00000508382 COLQQ9Y215 455 aaPredicted RBP17.31■□□□□ 0.36
SGCA-206ENST00000508382 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
SGCA-206ENST00000508382 SULF1Q8IWU6 871 aa17.3■□□□□ 0.36
SGCA-206ENST00000508382 SCAF8Q9UPN6 1271 aaKnown RBP17.3■□□□□ 0.36
SGCA-206ENST00000508382 RIMBP2O15034 1052 aa17.29■□□□□ 0.36
SGCA-206ENST00000508382 HCLS1P14317 486 aaPredicted RBP17.29■□□□□ 0.36
SGCA-206ENST00000508382 TM4SF4P48230 202 aa17.29■□□□□ 0.36
SGCA-206ENST00000508382 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
SGCA-206ENST00000508382 UBE2Q2LH0YL09 131 aa17.28■□□□□ 0.36
SGCA-206ENST00000508382 RPS12P25398 132 aaKnown RBP17.28■□□□□ 0.36
SGCA-206ENST00000508382 GRAPQ13588 217 aa17.28■□□□□ 0.36
SGCA-206ENST00000508382 ANGEL2Q5VTE6 544 aaKnown RBP17.28■□□□□ 0.36
SGCA-206ENST00000508382 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
SGCA-206ENST00000508382 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
SGCA-206ENST00000508382 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
SGCA-206ENST00000508382 TRIM35Q9UPQ4 493 aa17.28■□□□□ 0.36
SGCA-206ENST00000508382 RANBP2P49792 3224 aaKnown RBP17.27■□□□□ 0.36
SGCA-206ENST00000508382 COL6A3P12111 3177 aa17.27■□□□□ 0.36
SGCA-206ENST00000508382 DLL1O00548 723 aa17.27■□□□□ 0.36
SGCA-206ENST00000508382 ECE2O60344 883 aa17.27■□□□□ 0.36
SGCA-206ENST00000508382 FKTNO75072 461 aa17.27■□□□□ 0.36
SGCA-206ENST00000508382 MKRN3Q13064 507 aaKnown RBP17.27■□□□□ 0.36
SGCA-206ENST00000508382 DOK7Q18PE1 504 aa17.27■□□□□ 0.36
SGCA-206ENST00000508382 WASHC4Q2M389 1173 aa17.27■□□□□ 0.36
SGCA-206ENST00000508382 UTP14AQ9BVJ6 771 aaKnown RBP17.27■□□□□ 0.36
SGCA-206ENST00000508382 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
SGCA-206ENST00000508382 POLLQ9UGP5 575 aa17.27■□□□□ 0.36
SGCA-206ENST00000508382 LAMB1P07942 1786 aa17.26■□□□□ 0.35
SGCA-206ENST00000508382 EN2P19622 333 aaPredicted RBP17.26■□□□□ 0.35
SGCA-206ENST00000508382 TAF7Q15545 349 aaPredicted RBP17.26■□□□□ 0.35
SGCA-206ENST00000508382 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
SGCA-206ENST00000508382 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
SGCA-206ENST00000508382 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
SGCA-206ENST00000508382 ZNF646O15015 1829 aaPredicted RBP17.26■□□□□ 0.35
SGCA-206ENST00000508382 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 MS4A1P11836 297 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 GNAI1P63096 354 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 FKBP1BP68106 108 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 SCARF1Q14162 830 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 PRAMEF18Q5VWM3 479 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 THUMPD2Q9BTF0 503 aaKnown RBP17.25■□□□□ 0.35
SGCA-206ENST00000508382 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
SGCA-206ENST00000508382 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
SGCA-206ENST00000508382 EIF4A1P60842 406 aaKnown RBP17.24■□□□□ 0.35
SGCA-206ENST00000508382 AAMPQ13685 434 aa17.24■□□□□ 0.35
SGCA-206ENST00000508382 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
SGCA-206ENST00000508382 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
SGCA-206ENST00000508382 A0A0C4DFX4 3053 aa17.23■□□□□ 0.35
SGCA-206ENST00000508382 ZNF280AP59817 542 aaPredicted RBP17.23■□□□□ 0.35
SGCA-206ENST00000508382 GPSM2P81274 684 aa17.23■□□□□ 0.35
SGCA-206ENST00000508382 OTOP1Q7RTM1 612 aa17.23■□□□□ 0.35
SGCA-206ENST00000508382 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
SGCA-206ENST00000508382 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
SGCA-206ENST00000508382 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
SGCA-206ENST00000508382 CUL9Q8IWT3 2517 aa17.22■□□□□ 0.35
SGCA-206ENST00000508382 CAP1Q01518 475 aa17.22■□□□□ 0.35
SGCA-206ENST00000508382 PDIA6Q15084 440 aa17.22■□□□□ 0.35
SGCA-206ENST00000508382 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
SGCA-206ENST00000508382 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
SGCA-206ENST00000508382 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
SGCA-206ENST00000508382 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
SGCA-206ENST00000508382 ZNF609O15014 1411 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms