RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 FZD9O00144 591 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
CDH6-202ENST00000504835 BCAMP50895 628 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 KCNC4Q03721 635 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 SYNE4Q8N205 404 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
CDH6-202ENST00000504835 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 RIC1Q4ADV7 1423 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 UBN2Q6ZU65 1347 aa11.3□□□□□ -0.6
CDH6-202ENST00000504835 FOXN1O15353 648 aa11.29□□□□□ -0.6
CDH6-202ENST00000504835 RTKN2Q8IZC4 609 aa11.29□□□□□ -0.6
CDH6-202ENST00000504835 NGEFQ8N5V2 710 aa11.29□□□□□ -0.6
CDH6-202ENST00000504835 PLEKHF1Q96S99 279 aa11.29□□□□□ -0.6
CDH6-202ENST00000504835 THUMPD2Q9BTF0 503 aaKnown RBP11.29□□□□□ -0.6
CDH6-202ENST00000504835 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
CDH6-202ENST00000504835 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
CDH6-202ENST00000504835 EIF4A1P60842 406 aaKnown RBP11.28□□□□□ -0.6
CDH6-202ENST00000504835 LAPTM4AQ15012 233 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
CDH6-202ENST00000504835 ERVV-1B6SEH8 477 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 ALDH1B1P30837 517 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 EPHX2P34913 555 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 VEGFBP49765 207 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
CDH6-202ENST00000504835 PSMD1Q99460 953 aa11.28□□□□□ -0.6
CDH6-202ENST00000504835 DDX60Q8IY21 1712 aaKnown RBP11.27□□□□□ -0.6
CDH6-202ENST00000504835 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.61
CDH6-202ENST00000504835 HOXA10P31260 410 aaPredicted RBP11.27□□□□□ -0.61
CDH6-202ENST00000504835 SUSD4Q5VX71 490 aa11.27□□□□□ -0.61
CDH6-202ENST00000504835 MAP1SQ66K74 1059 aaPredicted RBP11.27□□□□□ -0.61
CDH6-202ENST00000504835 TYW1BQ6NUM6 668 aa11.27□□□□□ -0.61
CDH6-202ENST00000504835 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
CDH6-202ENST00000504835 RRP7AQ9Y3A4 280 aaKnown RBP11.27□□□□□ -0.61
CDH6-202ENST00000504835 POLR2AP24928 1970 aaKnown RBP11.26□□□□□ -0.61
CDH6-202ENST00000504835 NTSR2O95665 410 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 MYL6BP14649 208 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 GPTP24298 496 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 LRP10Q7Z4F1 713 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 GPC2Q8N158 579 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
CDH6-202ENST00000504835 COL9A1P20849 921 aa11.25□□□□□ -0.61
CDH6-202ENST00000504835 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
CDH6-202ENST00000504835 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH6-202ENST00000504835 NFE2L2Q16236 605 aa11.25□□□□□ -0.61
CDH6-202ENST00000504835 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
CDH6-202ENST00000504835 PNISRQ8TF01 805 aaKnown RBP11.25□□□□□ -0.61
CDH6-202ENST00000504835 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
CDH6-202ENST00000504835 SCNN1DP51172 638 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 KIF6Q6ZMV9 814 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 WBP1LQ9NX94 342 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 KIAA1468Q9P260 1216 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 RASSF10A6NK89 507 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 MFSD10Q14728 455 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 PDIA6Q15084 440 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 GIGYF2Q6Y7W6 1299 aaKnown RBP11.24□□□□□ -0.61
CDH6-202ENST00000504835 PNMA8AQ86V59 439 aaPredicted RBP11.24□□□□□ -0.61
CDH6-202ENST00000504835 CRAMP1Q96RY5 1269 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 PRDM10Q9NQV6 1147 aa11.24□□□□□ -0.61
CDH6-202ENST00000504835 COL4A1P02462 1669 aa11.23□□□□□ -0.61
CDH6-202ENST00000504835 DUOX1Q9NRD9 1551 aa11.23□□□□□ -0.61
CDH6-202ENST00000504835 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
CDH6-202ENST00000504835 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
CDH6-202ENST00000504835 EPS15P42566 896 aa11.23□□□□□ -0.61
CDH6-202ENST00000504835 PROSER3Q2NL68 480 aa11.23□□□□□ -0.61
CDH6-202ENST00000504835 CC2D2BQ6DHV5 1058 aa11.23□□□□□ -0.61
CDH6-202ENST00000504835 RPGRQ92834 1020 aaKnown RBP11.23□□□□□ -0.61
CDH6-202ENST00000504835 GJA3Q9Y6H8 435 aa11.23□□□□□ -0.61
CDH6-202ENST00000504835 ANXA1P04083 346 aa11.22□□□□□ -0.61
CDH6-202ENST00000504835 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
CDH6-202ENST00000504835 DEFB115Q30KQ5 88 aa11.22□□□□□ -0.61
CDH6-202ENST00000504835 JDP2Q8WYK2 163 aa11.22□□□□□ -0.61
CDH6-202ENST00000504835 DDX21Q9NR30 783 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDH6-202ENST00000504835 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
CDH6-202ENST00000504835 HSPA8P11142 646 aaKnown RBP11.21□□□□□ -0.61
CDH6-202ENST00000504835 CTCFP49711 727 aaPredicted RBP11.21□□□□□ -0.61
CDH6-202ENST00000504835 LBX1P52954 281 aa11.21□□□□□ -0.61
CDH6-202ENST00000504835 LARGE2Q8N3Y3 721 aa11.21□□□□□ -0.61
CDH6-202ENST00000504835 RBM17Q96I25 401 aaKnown RBP11.21□□□□□ -0.61
CDH6-202ENST00000504835 CASP8AP2Q9UKL3 1982 aa11.21□□□□□ -0.61
CDH6-202ENST00000504835 ABCC4O15439 1325 aa11.21□□□□□ -0.61
CDH6-202ENST00000504835 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.61
CDH6-202ENST00000504835 SLC10A5Q5PT55 438 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 TRAF5O00463 557 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 NEFMP07197 916 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 AOC3Q16853 763 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 CST9Q5W186 159 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 AIDAQ96BJ3 306 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 ATP6V0A2Q9Y487 856 aa11.2□□□□□ -0.62
CDH6-202ENST00000504835 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms