RNA–Protein interactions for RNA: ENST00000503369.1

AFF1-203, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-203ENST00000503369 DDB1Q16531 1140 aa8.31□□□□□ -1.08
AFF1-203ENST00000503369 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
AFF1-203ENST00000503369 RIC3Q7Z5B4 369 aa8.31□□□□□ -1.08
AFF1-203ENST00000503369 KRTAP4-12Q9BQ66 201 aa8.31□□□□□ -1.08
AFF1-203ENST00000503369 GPBP1L1Q9HC44 474 aaPredicted RBP8.31□□□□□ -1.08
AFF1-203ENST00000503369 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 SLIT3O75094 1523 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 CICQ96RK0 1608 aaPredicted RBP8.3□□□□□ -1.08
AFF1-203ENST00000503369 ITGB7P26010 798 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 SNRPNP63162 240 aaKnown RBP8.3□□□□□ -1.08
AFF1-203ENST00000503369 DIXDC1Q155Q3 683 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 DBN1Q16643 649 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 TMEM132EQ6IEE7 984 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 PRAM1Q96QH2 718 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 LRRC4BQ9NT99 713 aa8.3□□□□□ -1.08
AFF1-203ENST00000503369 TNS2Q63HR2 1409 aa8.29□□□□□ -1.08
AFF1-203ENST00000503369 COL8A1P27658 744 aa8.29□□□□□ -1.08
AFF1-203ENST00000503369 CHRNA2Q15822 529 aa8.29□□□□□ -1.08
AFF1-203ENST00000503369 QPCTQ16769 361 aa8.29□□□□□ -1.08
AFF1-203ENST00000503369 TXNRD1Q16881 649 aa8.29□□□□□ -1.08
AFF1-203ENST00000503369 TRIM22Q8IYM9 498 aa8.29□□□□□ -1.08
AFF1-203ENST00000503369 GPKOWQ92917 476 aaPredicted RBP eCLIP8.29□□□□□ -1.08
AFF1-203ENST00000503369 C14orf93Q9H972 538 aaKnown RBP8.29□□□□□ -1.08
AFF1-203ENST00000503369 SBF1O95248 1867 aa8.29□□□□□ -1.08
AFF1-203ENST00000503369 UBR3Q6ZT12 1888 aa8.28□□□□□ -1.08
AFF1-203ENST00000503369 POLR3AO14802 1390 aaPredicted RBP8.28□□□□□ -1.08
AFF1-203ENST00000503369 ADD1P35611 737 aaKnown RBP8.28□□□□□ -1.08
AFF1-203ENST00000503369 DHX9Q08211 1270 aaKnown RBP8.28□□□□□ -1.08
AFF1-203ENST00000503369 CSPP1Q1MSJ5 1256 aa8.28□□□□□ -1.08
AFF1-203ENST00000503369 LYSMD3Q7Z3D4 306 aa8.28□□□□□ -1.08
AFF1-203ENST00000503369 TSC1Q92574 1164 aa8.28□□□□□ -1.08
AFF1-203ENST00000503369 MON2Q7Z3U7 1717 aa8.28□□□□□ -1.08
AFF1-203ENST00000503369 USP19O94966 1318 aa8.28□□□□□ -1.08
AFF1-203ENST00000503369 ITGB4P16144 1822 aa8.27□□□□□ -1.09
AFF1-203ENST00000503369 ADCY9O60503 1353 aa8.27□□□□□ -1.09
AFF1-203ENST00000503369 LILRA1O75019 489 aa8.27□□□□□ -1.09
AFF1-203ENST00000503369 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
AFF1-203ENST00000503369 ZC3H6P61129 1189 aaKnown RBP8.27□□□□□ -1.09
AFF1-203ENST00000503369 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
AFF1-203ENST00000503369 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
AFF1-203ENST00000503369 GMCL1Q96IK5 515 aa8.27□□□□□ -1.09
AFF1-203ENST00000503369 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
AFF1-203ENST00000503369 LIMD1Q9UGP4 676 aa8.27□□□□□ -1.09
AFF1-203ENST00000503369 WASLO00401 505 aaPredicted RBP8.26□□□□□ -1.09
AFF1-203ENST00000503369 OIP5O43482 229 aa8.26□□□□□ -1.09
AFF1-203ENST00000503369 LILRB3O75022 631 aa8.26□□□□□ -1.09
AFF1-203ENST00000503369 ADH1AP07327 375 aa8.26□□□□□ -1.09
AFF1-203ENST00000503369 ITGAEP38570 1179 aa8.26□□□□□ -1.09
AFF1-203ENST00000503369 PTGIRP43119 386 aa8.26□□□□□ -1.09
AFF1-203ENST00000503369 OCSTAMPQ9BR26 566 aa8.26□□□□□ -1.09
AFF1-203ENST00000503369 CCDC7Q96M83 1385 aa8.25□□□□□ -1.09
AFF1-203ENST00000503369 RHOQP17081 205 aa8.25□□□□□ -1.09
AFF1-203ENST00000503369 SAFB2Q14151 953 aaKnown RBP eCLIP8.25□□□□□ -1.09
AFF1-203ENST00000503369 PDXDC2PQ6P474 469 aa8.25□□□□□ -1.09
AFF1-203ENST00000503369 NLRP13Q86W25 1043 aa8.25□□□□□ -1.09
AFF1-203ENST00000503369 PDGFDQ9GZP0 370 aaPredicted RBP8.25□□□□□ -1.09
AFF1-203ENST00000503369 CDV3Q9UKY7 258 aaKnown RBP8.25□□□□□ -1.09
AFF1-203ENST00000503369 PRR36Q9H6K5 1346 aa8.25□□□□□ -1.09
AFF1-203ENST00000503369 N4BP2Q86UW6 1770 aaPredicted RBP8.25□□□□□ -1.09
AFF1-203ENST00000503369 PRELPP51888 382 aa8.24□□□□□ -1.09
AFF1-203ENST00000503369 RGL3Q3MIN7 710 aa8.24□□□□□ -1.09
AFF1-203ENST00000503369 SLC10A4Q96EP9 437 aa8.24□□□□□ -1.09
AFF1-203ENST00000503369 WDR17Q8IZU2 1322 aa8.24□□□□□ -1.09
AFF1-203ENST00000503369 DICER1Q9UPY3 1922 aaKnown RBP8.23□□□□□ -1.09
AFF1-203ENST00000503369 RGPD2P0DJD1 1756 aa8.23□□□□□ -1.09
AFF1-203ENST00000503369 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
AFF1-203ENST00000503369 TOM1L2Q6ZVM7 507 aa8.23□□□□□ -1.09
AFF1-203ENST00000503369 PRICKLE2Q7Z3G6 844 aa8.23□□□□□ -1.09
AFF1-203ENST00000503369 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
AFF1-203ENST00000503369 GTPBP3Q969Y2 492 aaKnown RBP8.23□□□□□ -1.09
AFF1-203ENST00000503369 ARHGAP9Q9BRR9 750 aa8.23□□□□□ -1.09
AFF1-203ENST00000503369 CPSF1Q10570 1443 aaKnown RBP8.22□□□□□ -1.09
AFF1-203ENST00000503369 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
AFF1-203ENST00000503369 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
AFF1-203ENST00000503369 RNF144AP50876 292 aaPredicted RBP8.22□□□□□ -1.09
AFF1-203ENST00000503369 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
AFF1-203ENST00000503369 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
AFF1-203ENST00000503369 C1orf229Q6ZS94 237 aaPredicted RBP8.22□□□□□ -1.09
AFF1-203ENST00000503369 KIAA1551Q9HCM1 1747 aa8.22□□□□□ -1.09
AFF1-203ENST00000503369 USP6P35125 1406 aa8.21□□□□□ -1.09
AFF1-203ENST00000503369 GCP02774 474 aa8.21□□□□□ -1.1
AFF1-203ENST00000503369 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
AFF1-203ENST00000503369 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.1
AFF1-203ENST00000503369 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
AFF1-203ENST00000503369 NUDT16Q96DE0 195 aaKnown RBP8.21□□□□□ -1.1
AFF1-203ENST00000503369 KRTAP9-9Q9BYP9 154 aa8.21□□□□□ -1.1
AFF1-203ENST00000503369 KRTAP9-4Q9BYQ2 154 aa8.21□□□□□ -1.1
AFF1-203ENST00000503369 PPIP5K1Q6PFW1 1433 aa8.2□□□□□ -1.1
AFF1-203ENST00000503369 EXOC5O00471 708 aa8.2□□□□□ -1.1
AFF1-203ENST00000503369 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
AFF1-203ENST00000503369 CFAP70Q5T0N1 1121 aa8.2□□□□□ -1.1
AFF1-203ENST00000503369 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
AFF1-203ENST00000503369 HIRIP3Q9BW71 556 aaPredicted RBP8.2□□□□□ -1.1
AFF1-203ENST00000503369 ACEP12821 1306 aa8.2□□□□□ -1.1
AFF1-203ENST00000503369 TIAM2Q8IVF5 1701 aa8.2□□□□□ -1.1
AFF1-203ENST00000503369 TOMM70O94826 608 aa8.19□□□□□ -1.1
AFF1-203ENST00000503369 MX2P20592 715 aa8.19□□□□□ -1.1
AFF1-203ENST00000503369 MYSM1Q5VVJ2 828 aa8.19□□□□□ -1.1
AFF1-203ENST00000503369 RIPOR1Q6ZS17 1223 aa8.19□□□□□ -1.1
AFF1-203ENST00000503369 MARCH10Q8NA82 808 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms