RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
PBX1-211ENST00000498497 ZNF483Q8TF39 744 aaPredicted RBP13.41□□□□□ -0.26
PBX1-211ENST00000498497 PGBD1Q96JS3 809 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 ETAA1Q9NY74 926 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 KLHL33A6NCF5 533 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 NBPF9Q3BBW0 867 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 CEP85LQ5SZL2 805 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 IGSF22Q8N9C0 903 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
PBX1-211ENST00000498497 ABCC2Q92887 1545 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 ZNF202O95125 648 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 DCTN1Q14203 1278 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 LEO1Q8WVC0 666 aaPredicted RBP13.4□□□□□ -0.26
PBX1-211ENST00000498497 RPS6KL1Q9Y6S9 549 aa13.4□□□□□ -0.26
PBX1-211ENST00000498497 TXLNAP40222 546 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 ATP1A2P50993 1020 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 LONRF3Q496Y0 759 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 TRIM65Q6PJ69 517 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 MICAL1Q8TDZ2 1067 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 RANBP1P43487 201 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 KCNB1Q14721 858 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
PBX1-211ENST00000498497 NAT10Q9H0A0 1025 aaKnown RBP13.39□□□□□ -0.27
PBX1-211ENST00000498497 SERPINC1P01008 464 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 CHMLP26374 656 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
PBX1-211ENST00000498497 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
PBX1-211ENST00000498497 ARL10Q8N8L6 244 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
PBX1-211ENST00000498497 TPCN1Q9ULQ1 816 aa13.39□□□□□ -0.27
PBX1-211ENST00000498497 MYO1BO43795 1136 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 STK11IPQ8N1F8 1099 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 LRRCC1Q9C099 1032 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 F6X3S4 739 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
PBX1-211ENST00000498497 ADKP55263 362 aaKnown RBP13.38□□□□□ -0.27
PBX1-211ENST00000498497 GSDMDP57764 484 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 TRDNQ13061 729 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 STX1AQ16623 288 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
PBX1-211ENST00000498497 DHX40Q8IX18 779 aaKnown RBP13.38□□□□□ -0.27
PBX1-211ENST00000498497 CEP57L1Q8IYX8 460 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 TBC1D22AQ8WUA7 517 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 MCM8Q9UJA3 840 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 SYNMO15061 1565 aa13.38□□□□□ -0.27
PBX1-211ENST00000498497 SHTN1A0MZ66 631 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 NDUFAB1O14561 156 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 CDR1P51861 262 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 GNGT1P63211 74 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 DPCR1Q3MIW9 517 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 RGS12O14924 1447 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 CCDC151A5D8V7 595 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 KINO60870 393 aaKnown RBP13.37□□□□□ -0.27
PBX1-211ENST00000498497 KIF4BQ2VIQ3 1234 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 MFSD4BQ5TF39 518 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 TOGARAM2Q6ZUX3 1019 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
PBX1-211ENST00000498497 ARMC2Q8NEN0 867 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 CPP00450 1065 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 IRX1P78414 480 aaPredicted RBP13.37□□□□□ -0.27
PBX1-211ENST00000498497 MTF1Q14872 753 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 ME3Q16798 604 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
PBX1-211ENST00000498497 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
PBX1-211ENST00000498497 A0A1B0GUA9 196 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 H3BQV1 296 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 DIAPH1O60610 1272 aaKnown RBP13.36□□□□□ -0.27
PBX1-211ENST00000498497 ERLIN1O75477 346 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 USP5P45974 858 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 ME1P48163 572 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 TRIM74Q86UV6 250 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 TRIM73Q86UV7 250 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
PBX1-211ENST00000498497 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
PBX1-211ENST00000498497 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 DPF2Q92785 391 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 ANKZF1Q9H8Y5 726 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 PPP2R2CQ9Y2T4 447 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
PBX1-211ENST00000498497 VWA3AA6NCI4 1184 aa13.35□□□□□ -0.27
PBX1-211ENST00000498497 BACH1O14867 736 aa13.35□□□□□ -0.27
PBX1-211ENST00000498497 ATP8B1O43520 1251 aa13.35□□□□□ -0.27
PBX1-211ENST00000498497 PDCLQ13371 301 aa13.35□□□□□ -0.27
PBX1-211ENST00000498497 KCTD16Q68DU8 428 aa13.35□□□□□ -0.27
PBX1-211ENST00000498497 CEP85Q6P2H3 762 aa13.35□□□□□ -0.27
PBX1-211ENST00000498497 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
PBX1-211ENST00000498497 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms