RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 PPARGC1BQ86YN6 1023 aaKnown RBP20.08■□□□□ 0.8
PBX1-211ENST00000498497 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
PBX1-211ENST00000498497 HRCP23327 699 aa19.85■□□□□ 0.77
PBX1-211ENST00000498497 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
PBX1-211ENST00000498497 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
PBX1-211ENST00000498497 MYT1Q01538 1121 aa19.31■□□□□ 0.68
PBX1-211ENST00000498497 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
PBX1-211ENST00000498497 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
PBX1-211ENST00000498497 NEUROD1Q13562 356 aa18.72■□□□□ 0.59
PBX1-211ENST00000498497 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
PBX1-211ENST00000498497 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
PBX1-211ENST00000498497 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.57
PBX1-211ENST00000498497 PRKCSHP14314 528 aaPredicted RBP18.56■□□□□ 0.56
PBX1-211ENST00000498497 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
PBX1-211ENST00000498497 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
PBX1-211ENST00000498497 MYO15BQ96JP2 1530 aa18.41■□□□□ 0.54
PBX1-211ENST00000498497 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
PBX1-211ENST00000498497 CENPBP07199 599 aaPredicted RBP18.35■□□□□ 0.53
PBX1-211ENST00000498497 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
PBX1-211ENST00000498497 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
PBX1-211ENST00000498497 TTBK1Q5TCY1 1321 aaPredicted RBP18.13■□□□□ 0.49
PBX1-211ENST00000498497 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
PBX1-211ENST00000498497 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
PBX1-211ENST00000498497 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.48
PBX1-211ENST00000498497 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
PBX1-211ENST00000498497 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
PBX1-211ENST00000498497 ANP32EQ9BTT0 268 aa17.95■□□□□ 0.46
PBX1-211ENST00000498497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
PBX1-211ENST00000498497 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
PBX1-211ENST00000498497 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
PBX1-211ENST00000498497 ANO8Q9HCE9 1232 aaPredicted RBP17.66■□□□□ 0.42
PBX1-211ENST00000498497 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
PBX1-211ENST00000498497 BCANQ96GW7 911 aa17.63■□□□□ 0.41
PBX1-211ENST00000498497 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
PBX1-211ENST00000498497 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
PBX1-211ENST00000498497 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
PBX1-211ENST00000498497 MIER1Q8N108 512 aa17.52■□□□□ 0.39
PBX1-211ENST00000498497 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
PBX1-211ENST00000498497 APLP2Q06481 763 aa17.4■□□□□ 0.38
PBX1-211ENST00000498497 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.33■□□□□ 0.36
PBX1-211ENST00000498497 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.36
PBX1-211ENST00000498497 RTN4Q9NQC3 1192 aaKnown RBP17.27■□□□□ 0.36
PBX1-211ENST00000498497 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
PBX1-211ENST00000498497 ITGAEP38570 1179 aa17.24■□□□□ 0.35
PBX1-211ENST00000498497 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
PBX1-211ENST00000498497 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
PBX1-211ENST00000498497 DEKP35659 375 aaKnown RBP17.1■□□□□ 0.33
PBX1-211ENST00000498497 MSH5O43196 834 aa17.09■□□□□ 0.33
PBX1-211ENST00000498497 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.33
PBX1-211ENST00000498497 FKBP8Q14318 412 aa17.07■□□□□ 0.32
PBX1-211ENST00000498497 NBR1Q14596 966 aa17.07■□□□□ 0.32
PBX1-211ENST00000498497 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
PBX1-211ENST00000498497 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
PBX1-211ENST00000498497 IL27Q8NEV9 243 aa16.92■□□□□ 0.3
PBX1-211ENST00000498497 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
PBX1-211ENST00000498497 UBE2Q2Q8WVN8 375 aa16.81■□□□□ 0.28
PBX1-211ENST00000498497 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
PBX1-211ENST00000498497 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
PBX1-211ENST00000498497 NEFLP07196 543 aa16.78■□□□□ 0.28
PBX1-211ENST00000498497 PKNOX2Q96KN3 472 aa16.72■□□□□ 0.27
PBX1-211ENST00000498497 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
PBX1-211ENST00000498497 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
PBX1-211ENST00000498497 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
PBX1-211ENST00000498497 RTL5Q5HYW3 569 aaPredicted RBP16.57■□□□□ 0.24
PBX1-211ENST00000498497 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
PBX1-211ENST00000498497 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
PBX1-211ENST00000498497 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
PBX1-211ENST00000498497 SLC24A1O60721 1099 aa16.45■□□□□ 0.22
PBX1-211ENST00000498497 ERICH6BQ5W0A0 696 aa16.45■□□□□ 0.22
PBX1-211ENST00000498497 A0A0U1RQG5 324 aaPredicted RBP16.43■□□□□ 0.22
PBX1-211ENST00000498497 FANCIQ9NVI1 1328 aa16.43■□□□□ 0.22
PBX1-211ENST00000498497 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
PBX1-211ENST00000498497 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
PBX1-211ENST00000498497 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
PBX1-211ENST00000498497 BRPF3Q9ULD4 1205 aa16.39■□□□□ 0.21
PBX1-211ENST00000498497 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
PBX1-211ENST00000498497 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
PBX1-211ENST00000498497 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
PBX1-211ENST00000498497 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.21
PBX1-211ENST00000498497 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.21
PBX1-211ENST00000498497 B4GALNT3Q6L9W6 998 aa16.32■□□□□ 0.2
PBX1-211ENST00000498497 ABCC9O60706 1549 aa16.31■□□□□ 0.2
PBX1-211ENST00000498497 ZMYND15Q9H091 742 aa16.28■□□□□ 0.2
PBX1-211ENST00000498497 NEFMP07197 916 aa16.21■□□□□ 0.19
PBX1-211ENST00000498497 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
PBX1-211ENST00000498497 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
PBX1-211ENST00000498497 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
PBX1-211ENST00000498497 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
PBX1-211ENST00000498497 C11orf95C9JLR9 678 aaPredicted RBP16.18■□□□□ 0.18
PBX1-211ENST00000498497 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
PBX1-211ENST00000498497 UBTFP17480 764 aaKnown RBP16.15■□□□□ 0.18
PBX1-211ENST00000498497 ANP32AP39687 249 aaKnown RBP16.15■□□□□ 0.18
PBX1-211ENST00000498497 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
PBX1-211ENST00000498497 ARXQ96QS3 562 aa16.11■□□□□ 0.17
PBX1-211ENST00000498497 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.17
PBX1-211ENST00000498497 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.17
PBX1-211ENST00000498497 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
PBX1-211ENST00000498497 IPO9Q96P70 1041 aaKnown RBP16.02■□□□□ 0.15
PBX1-211ENST00000498497 ANP32CO43423 234 aa15.98■□□□□ 0.15
PBX1-211ENST00000498497 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms