RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 IL16Q14005 1332 aa12.64□□□□□ -0.39
SCNM1-206ENST00000497147 A0A0C4DFX4 3053 aa12.64□□□□□ -0.39
SCNM1-206ENST00000497147 CHL1O00533 1208 aa12.64□□□□□ -0.39
SCNM1-206ENST00000497147 FBXO46Q6PJ61 603 aaPredicted RBP12.64□□□□□ -0.39
SCNM1-206ENST00000497147 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
SCNM1-206ENST00000497147 GGA3Q9NZ52 723 aa12.64□□□□□ -0.39
SCNM1-206ENST00000497147 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
SCNM1-206ENST00000497147 POLR2AP24928 1970 aaKnown RBP12.63□□□□□ -0.39
SCNM1-206ENST00000497147 MOB2Q70IA6 237 aa12.63□□□□□ -0.39
SCNM1-206ENST00000497147 PPP1R42Q7Z4L9 355 aa12.63□□□□□ -0.39
SCNM1-206ENST00000497147 R3HDMLQ9H3Y0 253 aa12.63□□□□□ -0.39
SCNM1-206ENST00000497147 DBNDD1Q9H9R9 158 aa12.63□□□□□ -0.39
SCNM1-206ENST00000497147 LAMB4A4D0S4 1761 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 GPR25O00155 361 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
SCNM1-206ENST00000497147 RPS12P25398 132 aaKnown RBP12.62□□□□□ -0.39
SCNM1-206ENST00000497147 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 KIF4BQ2VIQ3 1234 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 UTP14AQ9BVJ6 771 aaKnown RBP12.62□□□□□ -0.39
SCNM1-206ENST00000497147 MYH16Q9H6N6 1097 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
SCNM1-206ENST00000497147 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
SCNM1-206ENST00000497147 ZNF853P0CG23 659 aa12.61□□□□□ -0.39
SCNM1-206ENST00000497147 GRAPQ13588 217 aa12.61□□□□□ -0.39
SCNM1-206ENST00000497147 WASHC4Q2M389 1173 aa12.61□□□□□ -0.39
SCNM1-206ENST00000497147 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
SCNM1-206ENST00000497147 GRAPLQ8TC17 118 aaPredicted RBP12.61□□□□□ -0.39
SCNM1-206ENST00000497147 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
SCNM1-206ENST00000497147 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
SCNM1-206ENST00000497147 TM4SF4P48230 202 aa12.6□□□□□ -0.39
SCNM1-206ENST00000497147 EIF4A1P60842 406 aaKnown RBP12.6□□□□□ -0.39
SCNM1-206ENST00000497147 ANGEL2Q5VTE6 544 aaKnown RBP12.6□□□□□ -0.39
SCNM1-206ENST00000497147 LRP10Q7Z4F1 713 aa12.6□□□□□ -0.39
SCNM1-206ENST00000497147 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
SCNM1-206ENST00000497147 POLLQ9UGP5 575 aa12.6□□□□□ -0.39
SCNM1-206ENST00000497147 ZBED9Q6R2W3 1325 aa12.6□□□□□ -0.39
SCNM1-206ENST00000497147 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
SCNM1-206ENST00000497147 RANBP2P49792 3224 aaKnown RBP12.59□□□□□ -0.39
SCNM1-206ENST00000497147 E9PSI1 815 aa12.59□□□□□ -0.39
SCNM1-206ENST00000497147 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
SCNM1-206ENST00000497147 ECE2O60344 883 aa12.59□□□□□ -0.39
SCNM1-206ENST00000497147 FKBP1BP68106 108 aa12.59□□□□□ -0.39
SCNM1-206ENST00000497147 SCARF1Q14162 830 aa12.59□□□□□ -0.39
SCNM1-206ENST00000497147 DOK7Q18PE1 504 aa12.59□□□□□ -0.39
SCNM1-206ENST00000497147 DDX46Q7L014 1031 aaKnown RBP12.59□□□□□ -0.39
SCNM1-206ENST00000497147 SCAF8Q9UPN6 1271 aaKnown RBP12.59□□□□□ -0.39
SCNM1-206ENST00000497147 COLQQ9Y215 455 aaPredicted RBP12.59□□□□□ -0.39
SCNM1-206ENST00000497147 LAMB2P55268 1798 aa12.58□□□□□ -0.39
SCNM1-206ENST00000497147 FKTNO75072 461 aa12.58□□□□□ -0.4
SCNM1-206ENST00000497147 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
SCNM1-206ENST00000497147 TAF1P21675 1872 aa12.58□□□□□ -0.4
SCNM1-206ENST00000497147 PDIA6Q15084 440 aa12.58□□□□□ -0.4
SCNM1-206ENST00000497147 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
SCNM1-206ENST00000497147 LRRC37AA6NMS7 1700 aa12.57□□□□□ -0.4
SCNM1-206ENST00000497147 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
SCNM1-206ENST00000497147 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
SCNM1-206ENST00000497147 GPSM2P81274 684 aa12.57□□□□□ -0.4
SCNM1-206ENST00000497147 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
SCNM1-206ENST00000497147 PRAMEF18Q5VWM3 479 aa12.57□□□□□ -0.4
SCNM1-206ENST00000497147 NLRP10Q86W26 655 aa12.57□□□□□ -0.4
SCNM1-206ENST00000497147 CFHR5Q9BXR6 569 aa12.57□□□□□ -0.4
SCNM1-206ENST00000497147 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
SCNM1-206ENST00000497147 COL4A1P02462 1669 aa12.57□□□□□ -0.4
SCNM1-206ENST00000497147 ANKRD36CQ5JPF3 1778 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 COL6A3P12111 3177 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 DUSP27Q5VZP5 1158 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 CELF1Q92879 486 aaKnown RBP12.56□□□□□ -0.4
SCNM1-206ENST00000497147 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
SCNM1-206ENST00000497147 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
SCNM1-206ENST00000497147 HOXB7P09629 217 aa12.55□□□□□ -0.4
SCNM1-206ENST00000497147 EN2P19622 333 aaPredicted RBP12.55□□□□□ -0.4
SCNM1-206ENST00000497147 EIF2S2P20042 333 aaKnown RBP12.55□□□□□ -0.4
SCNM1-206ENST00000497147 EXOSC9Q06265 439 aaKnown RBP12.55□□□□□ -0.4
SCNM1-206ENST00000497147 TWISTNBQ3B726 338 aaPredicted RBP12.55□□□□□ -0.4
SCNM1-206ENST00000497147 INTS3Q68E01 1043 aaKnown RBP12.55□□□□□ -0.4
SCNM1-206ENST00000497147 OTOP1Q7RTM1 612 aa12.55□□□□□ -0.4
SCNM1-206ENST00000497147 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
SCNM1-206ENST00000497147 CHMP4AQ9BY43 222 aa12.55□□□□□ -0.4
SCNM1-206ENST00000497147 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
SCNM1-206ENST00000497147 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 ANXA1P04083 346 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 TBC1D16Q8TBP0 767 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 NECTIN2Q92692 538 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 GMLQ99445 158 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
SCNM1-206ENST00000497147 DLL1O00548 723 aa12.53□□□□□ -0.4
SCNM1-206ENST00000497147 PITPNM2Q9BZ72 1349 aa12.53□□□□□ -0.4
SCNM1-206ENST00000497147 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms