RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 PLCB3Q01970 1234 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 STAG1Q8WVM7 1258 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 CUL5Q93034 780 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 AFG3L2Q9Y4W6 797 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 FLOT2Q14254 428 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 WDR78Q5VTH9 848 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 KANK3Q6NY19 840 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 JAKMIP1Q96N16 626 aaKnown RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 DNAI1Q9UI46 699 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 I3L4J1 428 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 KRT83P78385 493 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 CALML4Q96GE6 196 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 RMDN2Q96LZ7 410 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 CNNM1Q9NRU3 951 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 BAIAP2L1Q9UHR4 511 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 RIOK3O14730 519 aaKnown RBP5.84□□□□□ -1.47
NF1-216ENST00000495910 HIP1RO75146 1068 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 PPFIA1Q13136 1202 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 RILPL1Q5EBL4 403 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 IFT81Q8WYA0 676 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 SPDL1Q96EA4 605 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 NEK2P51955 445 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 SYCP3Q8IZU3 236 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 HAUS1Q96CS2 278 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 TNIKQ9UKE5 1360 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 EEF2P13639 858 aaKnown RBP5.84□□□□□ -1.47
NF1-216ENST00000495910 ESRRGP62508 458 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 CCDC25Q86WR0 208 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 DDX21Q9NR30 783 aaKnown RBP eCLIP5.84□□□□□ -1.47
NF1-216ENST00000495910 MRFAP1Q9Y605 127 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 BLVRAP53004 296 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 NOP14P78316 857 aaKnown RBP5.84□□□□□ -1.47
NF1-216ENST00000495910 PKD2Q13563 968 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 ANKRD20A4Q4UJ75 823 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 ANKRD20A8PQ5CZ79 823 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 ANKRD20A2Q5SQ80 823 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 ANKRD20A1Q5TYW2 823 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 SCOCQ9UIL1 159 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 PAIP2BQ9ULR5 123 aaKnown RBP5.84□□□□□ -1.47
NF1-216ENST00000495910 CEP162Q5TB80 1403 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 PLEKHH1Q9ULM0 1364 aa5.84□□□□□ -1.47
NF1-216ENST00000495910 PHACTR2O75167 634 aa5.84□□□□□ -1.48
NF1-216ENST00000495910 ITIH3Q06033 890 aa5.84□□□□□ -1.48
NF1-216ENST00000495910 SRCIN1Q9C0H9 1055 aa5.84□□□□□ -1.48
NF1-216ENST00000495910 BAG5Q9UL15 447 aa5.84□□□□□ -1.48
NF1-216ENST00000495910 PDZRN3Q9UPQ7 1066 aa5.84□□□□□ -1.48
NF1-216ENST00000495910 EID1Q9Y6B2 187 aa5.84□□□□□ -1.48
NF1-216ENST00000495910 PDS5BQ9NTI5 1447 aa5.84□□□□□ -1.48
NF1-216ENST00000495910 EEF1DP29692 281 aaKnown RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 UAP1Q16222 522 aaPredicted RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 KIF6Q6ZMV9 814 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 PIK3R5Q8WYR1 880 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 CCDC124Q96CT7 223 aaKnown RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 NEK1Q96PY6 1258 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 CSRNP2Q9H175 543 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 ZNF287Q9HBT7 754 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 RIPOR2Q9Y4F9 1068 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 PPP1R12AO14974 1030 aaPredicted RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 CREB3O43889 395 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 NUCB1Q02818 461 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 DUSP27Q5VZP5 1158 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 TMCO5AQ8N6Q1 288 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 MSANTD4Q8NCY6 345 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 CABS1Q96KC9 395 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 TACO1Q9BSH4 297 aaKnown RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 RMND1Q9NWS8 449 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.83□□□□□ -1.48
NF1-216ENST00000495910 APAF1O14727 1248 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 CCDC26Q8TAB7 109 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 KRT86O43790 486 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 TERF1P54274 439 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 HHATQ5VTY9 493 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 GRAMD4Q6IC98 578 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 SUFUQ9UMX1 484 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 N4BP3O15049 544 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 SKILP12757 684 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 KCNA4P22459 653 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 GJC1P36383 396 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 NOLC1Q14978 699 aaKnown RBP eCLIP5.83□□□□□ -1.48
NF1-216ENST00000495910 CCDC82Q8N4S0 544 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 WASHC2CQ9Y4E1 1318 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 A0A087WZG4 1122 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 ARHGAP42A6NI28 874 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 RBM5P52756 815 aaKnown RBP eCLIP5.83□□□□□ -1.48
NF1-216ENST00000495910 GABPB1Q06547 395 aaPredicted RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 CCDC117Q8IWD4 279 aaPredicted RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 RUNDC1Q96C34 613 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 KRT10P13645 584 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 CHMP4BP1P59074 171 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 PNISRQ8TF01 805 aaKnown RBP5.83□□□□□ -1.48
NF1-216ENST00000495910 NLRP7Q8WX94 980 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 WWC3Q9ULE0 1092 aa5.83□□□□□ -1.48
NF1-216ENST00000495910 TMEM110-MUSTN1A8MSY1 372 aa5.82□□□□□ -1.48
NF1-216ENST00000495910 HPDP32754 393 aaPredicted RBP5.82□□□□□ -1.48
NF1-216ENST00000495910 ANKRD20A3Q5VUR7 823 aa5.82□□□□□ -1.48
NF1-216ENST00000495910 HEATR3Q7Z4Q2 680 aa5.82□□□□□ -1.48
NF1-216ENST00000495910 PLCB1Q9NQ66 1216 aa5.82□□□□□ -1.48
NF1-216ENST00000495910 ATP6V0A2Q9Y487 856 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms