RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 RAD54L2Q9Y4B4 1467 aa7.55□□□□□ -1.2
RBM39-240ENST00000495293 TARBP1Q13395 1621 aaKnown RBP7.54□□□□□ -1.2
RBM39-240ENST00000495293 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
RBM39-240ENST00000495293 BTBD11A6QL63 1104 aa7.54□□□□□ -1.2
RBM39-240ENST00000495293 DEAF1O75398 565 aaPredicted RBP7.54□□□□□ -1.2
RBM39-240ENST00000495293 RFX1P22670 979 aa7.54□□□□□ -1.2
RBM39-240ENST00000495293 ETFBKMTQ8IXQ9 262 aa7.54□□□□□ -1.2
RBM39-240ENST00000495293 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
RBM39-240ENST00000495293 EPB42P16452 691 aa7.53□□□□□ -1.2
RBM39-240ENST00000495293 SRPK2P78362 688 aaKnown RBP7.53□□□□□ -1.2
RBM39-240ENST00000495293 TRIP4Q15650 581 aaPredicted RBP7.53□□□□□ -1.2
RBM39-240ENST00000495293 TREML1Q86YW5 311 aa7.53□□□□□ -1.2
RBM39-240ENST00000495293 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
RBM39-240ENST00000495293 STK32AQ8WU08 396 aa7.53□□□□□ -1.2
RBM39-240ENST00000495293 FRRS1LQ9P0K9 344 aa7.53□□□□□ -1.2
RBM39-240ENST00000495293 TDRD9Q8NDG6 1382 aaKnown RBP7.53□□□□□ -1.2
RBM39-240ENST00000495293 AQRO60306 1485 aaKnown RBP eCLIP7.53□□□□□ -1.22e-12■■■■□ 24.4
RBM39-240ENST00000495293 EIF4G3O43432 1585 aaKnown RBP7.53□□□□□ -1.2
RBM39-240ENST00000495293 WDR97A6NE52 1622 aa7.52□□□□□ -1.2
RBM39-240ENST00000495293 TOP2BQ02880 1626 aa7.52□□□□□ -1.2
RBM39-240ENST00000495293 J3QW42 95 aa7.52□□□□□ -1.21
RBM39-240ENST00000495293 PRMT3O60678 531 aa7.52□□□□□ -1.21
RBM39-240ENST00000495293 EGFRP00533 1210 aa7.52□□□□□ -1.21
RBM39-240ENST00000495293 RAC1P63000 192 aa7.52□□□□□ -1.21
RBM39-240ENST00000495293 SMG9Q9H0W8 520 aaKnown RBP7.52□□□□□ -1.21
RBM39-240ENST00000495293 BIVM-ERCC5R4GMW8 1640 aa7.52□□□□□ -1.21
RBM39-240ENST00000495293 MMP20O60882 483 aa7.51□□□□□ -1.21
RBM39-240ENST00000495293 NOS3P29474 1203 aa7.51□□□□□ -1.21
RBM39-240ENST00000495293 ELMSAN1Q6PJG2 1045 aa7.51□□□□□ -1.21
RBM39-240ENST00000495293 FBXO11Q86XK2 927 aa7.51□□□□□ -1.21
RBM39-240ENST00000495293 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
RBM39-240ENST00000495293 TLR7Q9NYK1 1049 aaKnown RBP7.51□□□□□ -1.21
RBM39-240ENST00000495293 SLAIN2Q9P270 581 aa7.51□□□□□ -1.21
RBM39-240ENST00000495293 USP21Q9UK80 565 aa7.51□□□□□ -1.21
RBM39-240ENST00000495293 TNFRSF10BO14763 440 aa7.5□□□□□ -1.21
RBM39-240ENST00000495293 XYLBO75191 536 aa7.5□□□□□ -1.21
RBM39-240ENST00000495293 H2AFB1P0C5Y9 115 aa7.5□□□□□ -1.21
RBM39-240ENST00000495293 H2AFB2P0C5Z0 115 aa7.5□□□□□ -1.21
RBM39-240ENST00000495293 CMTR1Q8N1G2 835 aaKnown RBP7.5□□□□□ -1.21
RBM39-240ENST00000495293 TP53INP1Q96A56 240 aa7.5□□□□□ -1.21
RBM39-240ENST00000495293 MEGF10Q96KG7 1140 aa7.5□□□□□ -1.21
RBM39-240ENST00000495293 NSUN5Q96P11 429 aaKnown RBP7.5□□□□□ -1.21
RBM39-240ENST00000495293 SYNJ1O43426 1573 aa7.5□□□□□ -1.21
RBM39-240ENST00000495293 ABCA10Q8WWZ4 1543 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.49□□□□□ -1.21
RBM39-240ENST00000495293 EIF2AK2P19525 551 aaKnown RBP7.49□□□□□ -1.21
RBM39-240ENST00000495293 NRLP54845 237 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 ADAMTSL4Q6UY14 1074 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 TTC9Q92623 222 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 VTI1AQ96AJ9 217 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 C11orf16Q9NQ32 467 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 ACIN1Q9UKV3 1341 aaKnown RBP7.49□□□□□ -1.21
RBM39-240ENST00000495293 GRIN2BQ13224 1484 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 GAPVD1Q14C86 1478 aa7.49□□□□□ -1.21
RBM39-240ENST00000495293 ARID3CA6NKF2 412 aa7.48□□□□□ -1.21
RBM39-240ENST00000495293 IREB2P48200 963 aaKnown RBP7.48□□□□□ -1.21
RBM39-240ENST00000495293 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
RBM39-240ENST00000495293 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
RBM39-240ENST00000495293 MKNK1Q9BUB5 465 aa7.48□□□□□ -1.21
RBM39-240ENST00000495293 ZMYND15Q9H091 742 aa7.48□□□□□ -1.21
RBM39-240ENST00000495293 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 DLL1O00548 723 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 PCSK7Q16549 785 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 SWI5Q1ZZU3 235 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 ARTNQ5T4W7 220 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
RBM39-240ENST00000495293 ERICH6Q7L0X2 663 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 DTWD1Q8N5C7 304 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 PLD4Q96BZ4 506 aa7.47□□□□□ -1.21
RBM39-240ENST00000495293 LOC102724428A0A0B4J2F2 783 aa7.46□□□□□ -1.22
RBM39-240ENST00000495293 ALX3O95076 343 aa7.46□□□□□ -1.22
RBM39-240ENST00000495293 HOXD8P13378 290 aaPredicted RBP7.46□□□□□ -1.22
RBM39-240ENST00000495293 SIK1P57059 783 aa7.46□□□□□ -1.22
RBM39-240ENST00000495293 ELOAQ14241 798 aaKnown RBP7.46□□□□□ -1.22
RBM39-240ENST00000495293 TRIM33Q9UPN9 1127 aa7.46□□□□□ -1.22
RBM39-240ENST00000495293 SNAPC4Q5SXM2 1469 aa7.46□□□□□ -1.22
RBM39-240ENST00000495293 MAGI1Q96QZ7 1491 aaPredicted RBP7.46□□□□□ -1.22
RBM39-240ENST00000495293 PBRM1Q86U86 1689 aa7.45□□□□□ -1.22
RBM39-240ENST00000495293 NAA30Q147X3 362 aaPredicted RBP7.45□□□□□ -1.22
RBM39-240ENST00000495293 TMEM164Q5U3C3 297 aa7.45□□□□□ -1.22
RBM39-240ENST00000495293 GDF6Q6KF10 455 aaPredicted RBP7.45□□□□□ -1.22
RBM39-240ENST00000495293 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
RBM39-240ENST00000495293 TM4SF5O14894 197 aa7.44□□□□□ -1.22
RBM39-240ENST00000495293 ZBTB39O15060 712 aa7.44□□□□□ -1.22
RBM39-240ENST00000495293 SETDB1Q15047 1291 aa7.44□□□□□ -1.22
RBM39-240ENST00000495293 C16orf46Q6P387 395 aa7.44□□□□□ -1.22
RBM39-240ENST00000495293 ZFP64Q9NPA5 681 aa7.44□□□□□ -1.22
RBM39-240ENST00000495293 ABCA5Q8WWZ7 1642 aa7.44□□□□□ -1.22
RBM39-240ENST00000495293 CHD1O14646 1710 aa7.44□□□□□ -1.22
RBM39-240ENST00000495293 SYNJ2O15056 1496 aa7.43□□□□□ -1.22
RBM39-240ENST00000495293 SOX18P35713 384 aa7.43□□□□□ -1.22
RBM39-240ENST00000495293 IGF2-ASQ6U949 168 aa7.43□□□□□ -1.22
RBM39-240ENST00000495293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.43□□□□□ -1.22
RBM39-240ENST00000495293 KIF27Q86VH2 1401 aa7.43□□□□□ -1.22
RBM39-240ENST00000495293 PSAPP07602 524 aa7.42□□□□□ -1.22
RBM39-240ENST00000495293 ATP11AP98196 1134 aa7.42□□□□□ -1.22
RBM39-240ENST00000495293 DZIP1LQ8IYY4 767 aaKnown RBP7.42□□□□□ -1.22
RBM39-240ENST00000495293 IL22RA1Q8N6P7 574 aa7.42□□□□□ -1.22
RBM39-240ENST00000495293 GALNT11Q8NCW6 608 aa7.42□□□□□ -1.22
RBM39-240ENST00000495293 ERICH3Q5RHP9 1530 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms