RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 PARP3Q9Y6F1 533 aa18.08■□□□□ 0.48
SNRNP200-205ENST00000480835 TAF1P21675 1872 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 A0A1B0GUL6 1792 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 ARAP2Q8WZ64 1704 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 A0A1B0GUL7 405 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 PDE8BO95263 885 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 ATP5JP18859 108 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 TSHZ3Q63HK5 1081 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 DDX46Q7L014 1031 aaKnown RBP18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 VGLL2Q8N8G2 317 aa18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
SNRNP200-205ENST00000480835 ATP2B3Q16720 1220 aa18.06■□□□□ 0.48
SNRNP200-205ENST00000480835 CNTROBQ8N137 903 aa18.06■□□□□ 0.48
SNRNP200-205ENST00000480835 NEUROD6Q96NK8 337 aa18.06■□□□□ 0.48
SNRNP200-205ENST00000480835 DBNDD2Q9BQY9 259 aa18.06■□□□□ 0.48
SNRNP200-205ENST00000480835 TLR7Q9NYK1 1049 aaKnown RBP18.06■□□□□ 0.48
SNRNP200-205ENST00000480835 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 KLRG2A4D1S0 409 aaPredicted RBP18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 MMP10P09238 476 aa18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 TIMM10P62072 90 aa18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 RPS8P62241 208 aaKnown RBP18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 PUM3Q15397 648 aaKnown RBP18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 CRY2Q49AN0 593 aa18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 CCDC24Q8N4L8 307 aa18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 SLC16A10Q8TF71 515 aa18.05■□□□□ 0.48
SNRNP200-205ENST00000480835 TBC1D9Q6ZT07 1266 aa18.04■□□□□ 0.48
SNRNP200-205ENST00000480835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNRNP200-205ENST00000480835 RPGRQ92834 1020 aaKnown RBP18.04■□□□□ 0.48
SNRNP200-205ENST00000480835 BRIP1Q9BX63 1249 aa18.04■□□□□ 0.48
SNRNP200-205ENST00000480835 UPF2Q9HAU5 1272 aaKnown RBP18.04■□□□□ 0.48
SNRNP200-205ENST00000480835 RBM19Q9Y4C8 960 aaKnown RBP18.04■□□□□ 0.48
SNRNP200-205ENST00000480835 SLC5A1P13866 664 aa18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 GRAPQ13588 217 aa18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 CCDC158Q5M9N0 1113 aa18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 LPIN2Q92539 896 aa18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 XAGE2Q96GT9 111 aa18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 RBM17Q96I25 401 aaKnown RBP18.03■□□□□ 0.48
SNRNP200-205ENST00000480835 FGFR2P21802 821 aa18.02■□□□□ 0.48
SNRNP200-205ENST00000480835 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.48
SNRNP200-205ENST00000480835 CHRNDQ07001 517 aa18.02■□□□□ 0.48
SNRNP200-205ENST00000480835 GORABQ5T7V8 394 aa18.02■□□□□ 0.48
SNRNP200-205ENST00000480835 CELF1Q92879 486 aaKnown RBP18.02■□□□□ 0.48
SNRNP200-205ENST00000480835 EVI5LQ96CN4 794 aa18.02■□□□□ 0.48
SNRNP200-205ENST00000480835 ANKRD2Q9GZV1 360 aa18.02■□□□□ 0.48
SNRNP200-205ENST00000480835 COL4A1P02462 1669 aa18.02■□□□□ 0.47
SNRNP200-205ENST00000480835 IFIT1P09914 478 aaKnown RBP18.01■□□□□ 0.47
SNRNP200-205ENST00000480835 PDE6BP35913 854 aa18.01■□□□□ 0.47
SNRNP200-205ENST00000480835 MSL1Q68DK7 614 aa18.01■□□□□ 0.47
SNRNP200-205ENST00000480835 TICAM2Q86XR7 235 aa18.01■□□□□ 0.47
SNRNP200-205ENST00000480835 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
SNRNP200-205ENST00000480835 BOLA2Q9H3K6 86 aa18.01■□□□□ 0.47
SNRNP200-205ENST00000480835 UBE4AQ14139 1066 aa18■□□□□ 0.47
SNRNP200-205ENST00000480835 TTC39AQ5SRH9 613 aa18■□□□□ 0.47
SNRNP200-205ENST00000480835 TMC4Q7Z404 712 aa18■□□□□ 0.47
SNRNP200-205ENST00000480835 UPF1Q92900 1129 aaKnown RBP eCLIP18■□□□□ 0.47
SNRNP200-205ENST00000480835 ZNF512BQ96KM6 892 aaPredicted RBP18■□□□□ 0.47
SNRNP200-205ENST00000480835 HAUS7Q99871 368 aa18■□□□□ 0.47
SNRNP200-205ENST00000480835 MINPP1Q9UNW1 487 aa18■□□□□ 0.47
SNRNP200-205ENST00000480835 HIP1O00291 1037 aa17.99■□□□□ 0.47
SNRNP200-205ENST00000480835 SEC24BO95487 1268 aa17.99■□□□□ 0.47
SNRNP200-205ENST00000480835 ADORA1P30542 326 aa17.99■□□□□ 0.47
SNRNP200-205ENST00000480835 HELBQ8NG08 1087 aaPredicted RBP17.99■□□□□ 0.47
SNRNP200-205ENST00000480835 RFX7Q2KHR2 1363 aa17.99■□□□□ 0.47
SNRNP200-205ENST00000480835 BBOX1O75936 387 aa17.98■□□□□ 0.47
SNRNP200-205ENST00000480835 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
SNRNP200-205ENST00000480835 UQCRFS1P1P0C7P4 283 aa17.98■□□□□ 0.47
SNRNP200-205ENST00000480835 CHMLP26374 656 aa17.98■□□□□ 0.47
SNRNP200-205ENST00000480835 TAF5LO75529 589 aa17.97■□□□□ 0.47
SNRNP200-205ENST00000480835 NPR1P16066 1061 aa17.97■□□□□ 0.47
SNRNP200-205ENST00000480835 AKAP11Q9UKA4 1901 aa17.97■□□□□ 0.47
SNRNP200-205ENST00000480835 LRRC37AA6NMS7 1700 aa17.96■□□□□ 0.47
SNRNP200-205ENST00000480835 ARID4AP29374 1257 aaPredicted RBP17.96■□□□□ 0.47
SNRNP200-205ENST00000480835 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
SNRNP200-205ENST00000480835 RUFY2Q8WXA3 655 aa17.96■□□□□ 0.47
SNRNP200-205ENST00000480835 COL11A2P13942 1736 aaPredicted RBP17.95■□□□□ 0.46
SNRNP200-205ENST00000480835 REC8O95072 547 aa17.95■□□□□ 0.46
SNRNP200-205ENST00000480835 SRGNP10124 158 aa17.95■□□□□ 0.46
SNRNP200-205ENST00000480835 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
SNRNP200-205ENST00000480835 ESYT1Q9BSJ8 1104 aa17.95■□□□□ 0.46
SNRNP200-205ENST00000480835 FSD1Q9BTV5 496 aa17.95■□□□□ 0.46
SNRNP200-205ENST00000480835 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
SNRNP200-205ENST00000480835 CCDC102BQ68D86 513 aa17.94■□□□□ 0.46
SNRNP200-205ENST00000480835 DNAJC2Q99543 621 aaKnown RBP17.94■□□□□ 0.46
SNRNP200-205ENST00000480835 DIAPH3Q9NSV4 1193 aa17.94■□□□□ 0.46
SNRNP200-205ENST00000480835 PAG1Q9NWQ8 432 aa17.94■□□□□ 0.46
SNRNP200-205ENST00000480835 LEMD3Q9Y2U8 911 aa17.94■□□□□ 0.46
SNRNP200-205ENST00000480835 ZBTB22O15209 634 aa17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 KCNJ4P48050 445 aa17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 LRRFIP1Q32MZ4 808 aaKnown RBP17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 KBTBD3Q8NAB2 608 aa17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 MYH7P12883 1935 aa17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 XDHP47989 1333 aa17.93■□□□□ 0.46
SNRNP200-205ENST00000480835 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
SNRNP200-205ENST00000480835 PHKA1P46020 1223 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms