RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 AKTIPQ9H8T0 292 aa3.04□□□□□ -1.92
SRRM1-211ENST00000478890 KCNH4Q9UQ05 1017 aa3.04□□□□□ -1.92
SRRM1-211ENST00000478890 ATAD2Q6PL18 1390 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 RTN1Q16799 776 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 CRTC2Q53ET0 693 aaPredicted RBP3.03□□□□□ -1.92
SRRM1-211ENST00000478890 KRT25Q7Z3Z0 450 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 BTLAQ7Z6A9 289 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 VSIG10LQ86VR7 867 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 ANKMY2Q8IV38 441 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 DMRTC2Q8IXT2 367 aaPredicted RBP3.03□□□□□ -1.92
SRRM1-211ENST00000478890 ZNF280CQ8ND82 737 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 GAS2L2Q8NHY3 880 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 C2orf49Q9BVC5 232 aaPredicted RBP3.03□□□□□ -1.92
SRRM1-211ENST00000478890 JPH1Q9HDC5 661 aaPredicted RBP3.03□□□□□ -1.92
SRRM1-211ENST00000478890 CCDC39Q9UFE4 941 aa3.03□□□□□ -1.92
SRRM1-211ENST00000478890 ZNF777Q9ULD5 760 aaPredicted RBP3.03□□□□□ -1.92
SRRM1-211ENST00000478890 CARMIL2Q6F5E8 1435 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 A6NJR5 290 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 FAM196BA6NMK8 535 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 PRNPP04156 253 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 NFKB1P19838 968 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 PTK7Q13308 1070 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 COL19A1Q14993 1142 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 CDCA8Q53HL2 280 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 RNF43Q68DV7 783 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 ILDR2Q71H61 639 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 FNBP4Q8N3X1 1017 aaPredicted RBP3.02□□□□□ -1.93
SRRM1-211ENST00000478890 AGBL5Q8NDL9 886 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 FAM200AQ8TCP9 573 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 NUDT8Q8WV74 236 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.02□□□□□ -1.932e-6■■■■■ 50.2
SRRM1-211ENST00000478890 KLK14Q9P0G3 267 aa3.02□□□□□ -1.93
SRRM1-211ENST00000478890 TGFBR3LH3BV60 316 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 DHX15O43143 795 aaKnown RBP3.01□□□□□ -1.93
SRRM1-211ENST00000478890 C21orf2O43822 256 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 RARAP10276 462 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 IGFBP4P22692 258 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 ARID4AP29374 1257 aaPredicted RBP3.01□□□□□ -1.93
SRRM1-211ENST00000478890 IDH3AP50213 366 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 DGKZQ13574 1117 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 STAG2Q8N3U4 1231 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 TMEM40Q8WWA1 233 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 SLC6A14Q9UN76 642 aa3.01□□□□□ -1.93
SRRM1-211ENST00000478890 NOVA2Q9UNW9 492 aaKnown RBP3.01□□□□□ -1.93
SRRM1-211ENST00000478890 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.01□□□□□ -1.93
SRRM1-211ENST00000478890 FOXO3O43524 673 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 RGS9O75916 674 aaPredicted RBP3□□□□□ -1.93
SRRM1-211ENST00000478890 TSPAN15O95858 294 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 CPB1P15086 417 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 ARSDP51689 593 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 KCNQ4P56696 695 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 MESP2Q0VG99 397 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 CCINQ13939 588 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 PCSK7Q16549 785 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 KANK4Q5T7N3 995 aaPredicted RBP3□□□□□ -1.93
SRRM1-211ENST00000478890 IER5Q5VY09 327 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 PSAPL1Q6NUJ1 521 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 FAM35AQ86V20 835 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 AMIGO3Q86WK7 504 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 ANKLE2Q86XL3 938 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 TMEM130Q8N3G9 435 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 DNAJB12Q9NXW2 375 aaKnown RBP3□□□□□ -1.93
SRRM1-211ENST00000478890 FAM53CQ9NYF3 392 aa3□□□□□ -1.93
SRRM1-211ENST00000478890 PRMT3O60678 531 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 DKK1O94907 266 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 EIF2AK2P19525 551 aaKnown RBP2.99□□□□□ -1.93
SRRM1-211ENST00000478890 AFF1P51825 1210 aaKnown RBP2.99□□□□□ -1.93
SRRM1-211ENST00000478890 MLLT1Q03111 559 aaPredicted RBP2.99□□□□□ -1.93
SRRM1-211ENST00000478890 CFAP70Q5T0N1 1121 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 ELMSAN1Q6PJG2 1045 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 Q6ZS46 218 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 RGL4Q8IZJ4 473 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 CMTR1Q8N1G2 835 aaKnown RBP2.99□□□□□ -1.93
SRRM1-211ENST00000478890 CCDC97Q96F63 343 aaPredicted RBP2.99□□□□□ -1.93
SRRM1-211ENST00000478890 PRIMPOLQ96LW4 560 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 MKNK1Q9BUB5 465 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 EFCC1Q9HA90 598 aa2.99□□□□□ -1.93
SRRM1-211ENST00000478890 MICAL2O94851 1124 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 GHRHP01286 108 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 HOXA5P20719 270 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 KRTAP10-2P60368 255 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 C11orf91Q3C1V1 193 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 POTEAQ6S8J7 498 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 NFXL1Q6ZNB6 911 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 DHX32Q7L7V1 743 aaKnown RBP2.98□□□□□ -1.93
SRRM1-211ENST00000478890 WFDC8Q8IUA0 241 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 C7orf43Q8WVR3 580 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 IFT43Q96FT9 208 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 CRELD1Q96HD1 420 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 C20orf173Q96LM9 149 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 PPP1R16BQ96T49 567 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 GSX2Q9BZM3 304 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 RBSNQ9H1K0 784 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 C7orf69Q9H7B7 122 aa2.98□□□□□ -1.93
SRRM1-211ENST00000478890 QTRT2Q9H974 415 aaKnown RBP2.98□□□□□ -1.93
SRRM1-211ENST00000478890 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.97□□□□□ -1.93
SRRM1-211ENST00000478890 FAM177BA6PVY3 158 aa2.97□□□□□ -1.93
SRRM1-211ENST00000478890 F8W735 103 aaPredicted RBP2.97□□□□□ -1.93
SRRM1-211ENST00000478890 FOXD2O60548 495 aaPredicted RBP2.97□□□□□ -1.93
SRRM1-211ENST00000478890 XYLBO75191 536 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms