RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 GPATCH3Q96I76 525 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 DBNDD2Q9BQY9 259 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 SNRKQ9NRH2 765 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 SYT1P21579 422 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 SYTL4Q96C24 671 aaPredicted RBP7.19□□□□□ -1.26
SH3D19-207ENST00000478503 FMN2Q9NZ56 1722 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 ALDH1L1O75891 902 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 SPOCK2Q92563 424 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 FAM177BA6PVY3 158 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 HOXB7P09629 217 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 SNRPA1P09661 255 aaKnown RBP7.18□□□□□ -1.26
SH3D19-207ENST00000478503 GJB2P29033 226 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 NAP1L1P55209 391 aaKnown RBP7.18□□□□□ -1.26
SH3D19-207ENST00000478503 CHST3Q7LGC8 479 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 NBPF11Q86T75 865 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 SYNE4Q8N205 404 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 DBNLQ9UJU6 430 aaKnown RBP7.18□□□□□ -1.26
SH3D19-207ENST00000478503 A0A0G2JLW4 131 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 DNM1Q05193 864 aaKnown RBP7.18□□□□□ -1.26
SH3D19-207ENST00000478503 MYBPC2Q14324 1141 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 ENOX2Q16206 610 aaKnown RBP7.18□□□□□ -1.26
SH3D19-207ENST00000478503 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 POM121Q96HA1 1249 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 TFIP11Q9UBB9 837 aaKnown RBP7.18□□□□□ -1.26
SH3D19-207ENST00000478503 LIMCH1Q9UPQ0 1083 aa7.18□□□□□ -1.26
SH3D19-207ENST00000478503 CEBPZQ03701 1054 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 ME3Q16798 604 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 CREB3L3Q68CJ9 461 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 PDILTQ8N807 584 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 CYP46A1Q9Y6A2 500 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 NFAT5O94916 1531 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 C1orf167Q5SNV9 1468 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 XRN1Q8IZH2 1706 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 PES1O00541 588 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 ZKSCAN1P17029 563 aaPredicted RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 EVA1CP58658 441 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 RHBDL3P58872 404 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 CUL4AQ13619 759 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 NBPF14Q5TI25 921 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 NBPF10Q6P3W6 841 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 RAB11FIP4Q86YS3 637 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 NBPF15Q8N660 670 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 FMNL2Q96PY5 1086 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 METTL22Q9BUU2 404 aaPredicted RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 TPCN1Q9ULQ1 816 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 MRVI1Q9Y6F6 885 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 STX6O43752 255 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 NRDCO43847 1150 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 ZNF500O60304 480 aaPredicted RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 GPTP24298 496 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 CALRP27797 417 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 NME8Q8N427 588 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 ZCRB1Q8TBF4 217 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 RUFY2Q8WXA3 655 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 PUS3Q9BZE2 481 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 MEGF6O75095 1541 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 CCDC171Q6TFL3 1326 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 DYTNA2CJ06 578 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 USP5P45974 858 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 MCM2P49736 904 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 LRRC24Q50LG9 513 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 SREK1Q8WXA9 508 aaKnown RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 LTN1O94822 1766 aa7.17□□□□□ -1.26
SH3D19-207ENST00000478503 KDM6AO15550 1401 aaPredicted RBP7.17□□□□□ -1.26
SH3D19-207ENST00000478503 PTPN12Q05209 780 aaKnown RBP7.16□□□□□ -1.26
SH3D19-207ENST00000478503 CAMK4Q16566 473 aa7.16□□□□□ -1.26
SH3D19-207ENST00000478503 TTC14Q96N46 770 aa7.16□□□□□ -1.26
SH3D19-207ENST00000478503 SLC27A2O14975 620 aa7.16□□□□□ -1.26
SH3D19-207ENST00000478503 VPS53Q5VIR6 699 aa7.16□□□□□ -1.26
SH3D19-207ENST00000478503 ERC1Q8IUD2 1116 aa7.16□□□□□ -1.26
SH3D19-207ENST00000478503 TTC41PQ6P2S7 1318 aa7.16□□□□□ -1.26
SH3D19-207ENST00000478503 FKBP4Q02790 459 aaKnown RBP eCLIP7.16□□□□□ -1.26
SH3D19-207ENST00000478503 DCAF5Q96JK2 942 aa7.16□□□□□ -1.26
SH3D19-207ENST00000478503 WDR33Q9C0J8 1336 aaKnown RBP7.15□□□□□ -1.26
SH3D19-207ENST00000478503 JAK2O60674 1132 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 ST3GAL1Q11201 340 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 MTX1Q13505 466 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 TNNI3KQ59H18 835 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 LARP1BQ659C4 914 aaKnown RBP7.15□□□□□ -1.26
SH3D19-207ENST00000478503 FAM89AQ96GI7 184 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 FPGT-TNNI3KV9GXZ4 949 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 PPFIA4O75335 1185 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 ZSCAN22P10073 491 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-207ENST00000478503 HCLS1P14317 486 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-207ENST00000478503 PI16Q6UXB8 463 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 CLEC17AQ6ZS10 378 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 PMM1Q92871 262 aa7.15□□□□□ -1.26
SH3D19-207ENST00000478503 RPAP1Q9BWH6 1393 aaPredicted RBP7.15□□□□□ -1.27
SH3D19-207ENST00000478503 CCDC189A1A4V9 331 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 HAND2P61296 217 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 GUCY1B3Q02153 619 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 NECTIN1Q15223 517 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 BLOC1S2Q6QNY1 142 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 CDC37L1Q7L3B6 337 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 STK11IPQ8N1F8 1099 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 PAF1Q8N7H5 531 aa7.15□□□□□ -1.27
SH3D19-207ENST00000478503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.15□□□□□ -1.27
SH3D19-207ENST00000478503 CCT2P78371 535 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms