RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 LMBR1LQ6UX01 489 aa24.94■■□□□ 1.58
COL18A1-207ENST00000473212 BCL2L12Q9HB09 334 aa24.94■■□□□ 1.58
COL18A1-207ENST00000473212 DDX19AQ9NUU7 478 aaKnown RBP24.94■■□□□ 1.58
COL18A1-207ENST00000473212 TSGA10IPQ3SY00 556 aa24.93■■□□□ 1.58
COL18A1-207ENST00000473212 FTOQ9C0B1 505 aaKnown RBP eCLIP24.93■■□□□ 1.581e-6■■■■■ 39.4
COL18A1-207ENST00000473212 SNRPA1P09661 255 aaKnown RBP24.93■■□□□ 1.58
COL18A1-207ENST00000473212 HSP90B1P14625 803 aaKnown RBP24.93■■□□□ 1.58
COL18A1-207ENST00000473212 TTC5Q8N0Z6 440 aa24.93■■□□□ 1.58
COL18A1-207ENST00000473212 GTF3C6Q969F1 213 aa24.93■■□□□ 1.58
COL18A1-207ENST00000473212 CLSTN2Q9H4D0 955 aa24.93■■□□□ 1.58
COL18A1-207ENST00000473212 RIOK3O14730 519 aaKnown RBP24.92■■□□□ 1.58
COL18A1-207ENST00000473212 CHAF1AQ13111 956 aaPredicted RBP24.92■■□□□ 1.58
COL18A1-207ENST00000473212 CCDC186Q7Z3E2 898 aa24.92■■□□□ 1.58
COL18A1-207ENST00000473212 DRC7Q8IY82 874 aa24.92■■□□□ 1.58
COL18A1-207ENST00000473212 BICD2Q8TD16 824 aa24.92■■□□□ 1.58
COL18A1-207ENST00000473212 TIMM10P62072 90 aa24.91■■□□□ 1.58
COL18A1-207ENST00000473212 RABL6Q3YEC7 729 aaPredicted RBP24.91■■□□□ 1.58
COL18A1-207ENST00000473212 IFNL2Q8IZJ0 200 aa24.91■■□□□ 1.58
COL18A1-207ENST00000473212 AFDNP55196 1824 aaKnown RBP24.91■■□□□ 1.58
COL18A1-207ENST00000473212 C1orf167Q5SNV9 1468 aa24.91■■□□□ 1.58
COL18A1-207ENST00000473212 CASP7P55210 303 aa24.91■■□□□ 1.58
COL18A1-207ENST00000473212 SCRN1Q12765 414 aa24.91■■□□□ 1.58
COL18A1-207ENST00000473212 NEUROD6Q96NK8 337 aa24.91■■□□□ 1.58
COL18A1-207ENST00000473212 NRBP1Q9UHY1 535 aa24.91■■□□□ 1.58
COL18A1-207ENST00000473212 RBM43Q6ZSC3 357 aaKnown RBP24.9■■□□□ 1.58
COL18A1-207ENST00000473212 TRIM5Q9C035 493 aa24.9■■□□□ 1.58
COL18A1-207ENST00000473212 LRMPQ12912 555 aa24.9■■□□□ 1.58
COL18A1-207ENST00000473212 PRDM10Q9NQV6 1147 aa24.9■■□□□ 1.58
COL18A1-207ENST00000473212 A0A087WWV3 80 aa24.89■■□□□ 1.58
COL18A1-207ENST00000473212 GOLIM4O00461 696 aa24.89■■□□□ 1.58
COL18A1-207ENST00000473212 CHST3Q7LGC8 479 aa24.89■■□□□ 1.58
COL18A1-207ENST00000473212 SMAP1Q8IYB5 467 aaPredicted RBP24.89■■□□□ 1.58
COL18A1-207ENST00000473212 ZNF594Q96JF6 807 aaPredicted RBP24.89■■□□□ 1.58
COL18A1-207ENST00000473212 HAUS7Q99871 368 aa24.89■■□□□ 1.58
COL18A1-207ENST00000473212 RESTQ13127 1097 aa24.89■■□□□ 1.57
COL18A1-207ENST00000473212 KRT32Q14532 448 aa24.89■■□□□ 1.57
COL18A1-207ENST00000473212 TTLL7Q6ZT98 887 aa24.89■■□□□ 1.57
COL18A1-207ENST00000473212 DNAJC25Q9H1X3 360 aa24.89■■□□□ 1.57
COL18A1-207ENST00000473212 NBPF26B4DH59 902 aa24.88■■□□□ 1.57
COL18A1-207ENST00000473212 ZNF75DP51815 510 aa24.88■■□□□ 1.57
COL18A1-207ENST00000473212 MCMDC2Q4G0Z9 681 aa24.88■■□□□ 1.57
COL18A1-207ENST00000473212 NBPF14Q5TI25 921 aa24.88■■□□□ 1.57
COL18A1-207ENST00000473212 NBPF10Q6P3W6 841 aaKnown RBP24.88■■□□□ 1.57
COL18A1-207ENST00000473212 NBPF15Q8N660 670 aa24.88■■□□□ 1.57
COL18A1-207ENST00000473212 ZNF165P49910 485 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 CCT2P78371 535 aaKnown RBP24.87■■□□□ 1.57
COL18A1-207ENST00000473212 PLA2G4DQ86XP0 818 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 FMNL2Q96PY5 1086 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 NCOA5Q9HCD5 579 aaKnown RBP24.87■■□□□ 1.57
COL18A1-207ENST00000473212 PRDM4Q9UKN5 801 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 H3BQV1 296 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 APOBRQ0VD83 1088 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 PPP4R3BQ5MIZ7 849 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 IFFO2Q5TF58 517 aa24.87■■□□□ 1.57
COL18A1-207ENST00000473212 TDRD7Q8NHU6 1098 aaKnown RBP24.87■■□□□ 1.57
COL18A1-207ENST00000473212 FOXO4P98177 505 aa24.86■■□□□ 1.57
COL18A1-207ENST00000473212 LRRC24Q50LG9 513 aa24.86■■□□□ 1.57
COL18A1-207ENST00000473212 ATG9AQ7Z3C6 839 aa24.86■■□□□ 1.57
COL18A1-207ENST00000473212 FGD1P98174 961 aa24.86■■□□□ 1.57
COL18A1-207ENST00000473212 CTDNEP1O95476 244 aa24.85■■□□□ 1.57
COL18A1-207ENST00000473212 CABP4P57796 275 aa24.85■■□□□ 1.57
COL18A1-207ENST00000473212 ARFGEF2Q9Y6D5 1785 aa24.85■■□□□ 1.57
COL18A1-207ENST00000473212 GUCY1B3Q02153 619 aa24.85■■□□□ 1.57
COL18A1-207ENST00000473212 DCAF5Q96JK2 942 aa24.85■■□□□ 1.57
COL18A1-207ENST00000473212 NAP1L2Q9ULW6 460 aaPredicted RBP24.85■■□□□ 1.57
COL18A1-207ENST00000473212 KBTBD3Q8NAB2 608 aa24.84■■□□□ 1.57
COL18A1-207ENST00000473212 U3KPZ7 1027 aaPredicted RBP24.84■■□□□ 1.57
COL18A1-207ENST00000473212 ZSCAN25Q6NSZ9 544 aa24.84■■□□□ 1.57
COL18A1-207ENST00000473212 ZNF142P52746 1687 aaPredicted RBP24.84■■□□□ 1.57
COL18A1-207ENST00000473212 A1BGP04217 495 aa24.83■■□□□ 1.57
COL18A1-207ENST00000473212 TTLL5Q6EMB2 1281 aa24.83■■□□□ 1.57
COL18A1-207ENST00000473212 ZBTB3Q9H5J0 574 aa24.83■■□□□ 1.57
COL18A1-207ENST00000473212 CBX1P83916 185 aa24.83■■□□□ 1.57
COL18A1-207ENST00000473212 C16orf45Q96MC5 204 aaPredicted RBP24.83■■□□□ 1.57
COL18A1-207ENST00000473212 GPHNQ9NQX3 736 aaPredicted RBP24.83■■□□□ 1.57
COL18A1-207ENST00000473212 LAMA4Q16363 1823 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.82■■□□□ 1.56
COL18A1-207ENST00000473212 NSUN7Q8NE18 718 aaKnown RBP24.82■■□□□ 1.56
COL18A1-207ENST00000473212 PLBD2Q8NHP8 589 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 PUS3Q9BZE2 481 aaKnown RBP24.82■■□□□ 1.56
COL18A1-207ENST00000473212 ALS2Q96Q42 1657 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 ADD1P35611 737 aaKnown RBP24.82■■□□□ 1.56
COL18A1-207ENST00000473212 ATP2B3Q16720 1220 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 PDCL2Q8N4E4 241 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 ERCC4Q92889 916 aaPredicted RBP24.82■■□□□ 1.56
COL18A1-207ENST00000473212 ZSCAN16Q9H4T2 348 aaPredicted RBP24.82■■□□□ 1.56
COL18A1-207ENST00000473212 C19orf44Q9H6X5 657 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 PAG1Q9NWQ8 432 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 CLIP2Q9UDT6 1046 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 CFAP45Q9UL16 551 aa24.82■■□□□ 1.56
COL18A1-207ENST00000473212 ADAMTSL3P82987 1691 aa24.81■■□□□ 1.56
COL18A1-207ENST00000473212 CTIFO43310 598 aaKnown RBP24.81■■□□□ 1.56
COL18A1-207ENST00000473212 CCDC85AQ96PX6 553 aaPredicted RBP24.8■■□□□ 1.56
COL18A1-207ENST00000473212 CCDC144BQ3MJ40 725 aa24.8■■□□□ 1.56
COL18A1-207ENST00000473212 CCDC144CPQ8IYA2 1237 aa24.8■■□□□ 1.56
COL18A1-207ENST00000473212 GOLPH3LQ9H4A5 285 aa24.8■■□□□ 1.56
COL18A1-207ENST00000473212 LMTK3Q96Q04 1460 aa24.8■■□□□ 1.56
COL18A1-207ENST00000473212 PTPDC1A2A3K4 754 aa24.79■■□□□ 1.56
COL18A1-207ENST00000473212 HSP90AB3PQ58FF7 597 aa24.79■■□□□ 1.56
COL18A1-207ENST00000473212 SMARCC2Q8TAQ2 1214 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms