RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 COL14A1Q05707 1796 aaKnown RBP8.23□□□□□ -1.09
PTCD3-207ENST00000467273 RRBP1Q9P2E9 1410 aaKnown RBP8.23□□□□□ -1.09
PTCD3-207ENST00000467273 SPATA31C2B4DYI2 1134 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 ERVK-9P63128 1117 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 KRT28Q7Z3Y7 464 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 CAMKK2Q96RR4 588 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTCD3-207ENST00000467273 CFHR5Q9BXR6 569 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 SUV39H2Q9H5I1 410 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 SPON1Q9HCB6 807 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 KNDC1Q76NI1 1749 aa8.23□□□□□ -1.09
PTCD3-207ENST00000467273 NBPF8Q3BBV2 869 aa8.22□□□□□ -1.09
PTCD3-207ENST00000467273 WDR44Q5JSH3 913 aa8.22□□□□□ -1.09
PTCD3-207ENST00000467273 FAM196AQ6ZSG2 479 aa8.22□□□□□ -1.09
PTCD3-207ENST00000467273 KRTAP9-2Q9BYQ4 174 aa8.22□□□□□ -1.09
PTCD3-207ENST00000467273 PPP1R1BQ9UD71 204 aaPredicted RBP8.22□□□□□ -1.09
PTCD3-207ENST00000467273 PPLO60437 1756 aa8.22□□□□□ -1.09
PTCD3-207ENST00000467273 ABCC11Q96J66 1382 aa8.22□□□□□ -1.09
PTCD3-207ENST00000467273 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.1
PTCD3-207ENST00000467273 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
PTCD3-207ENST00000467273 THBS1P07996 1170 aa8.21□□□□□ -1.1
PTCD3-207ENST00000467273 PHKA2P46019 1235 aa8.21□□□□□ -1.1
PTCD3-207ENST00000467273 EZH2Q15910 746 aaKnown RBP8.21□□□□□ -1.1
PTCD3-207ENST00000467273 GOLGA6L1Q8N7Z2 621 aa8.21□□□□□ -1.1
PTCD3-207ENST00000467273 RAB6BQ9NRW1 208 aa8.21□□□□□ -1.1
PTCD3-207ENST00000467273 SPATA31A5Q5VU36 1347 aa8.21□□□□□ -1.1
PTCD3-207ENST00000467273 SPATA31A7Q8IWB4 1347 aa8.21□□□□□ -1.1
PTCD3-207ENST00000467273 NUP188Q5SRE5 1749 aa8.2□□□□□ -1.1
PTCD3-207ENST00000467273 NRXN1Q9ULB1 1477 aa8.2□□□□□ -1.1
PTCD3-207ENST00000467273 FAM83GA6ND36 823 aa8.2□□□□□ -1.1
PTCD3-207ENST00000467273 KCNQ2O43526 872 aa8.2□□□□□ -1.1
PTCD3-207ENST00000467273 BMP4P12644 408 aa8.2□□□□□ -1.1
PTCD3-207ENST00000467273 SCTRP47872 440 aa8.2□□□□□ -1.1
PTCD3-207ENST00000467273 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
PTCD3-207ENST00000467273 GNB5O14775 395 aa8.19□□□□□ -1.1
PTCD3-207ENST00000467273 CD163Q86VB7 1156 aa8.19□□□□□ -1.1
PTCD3-207ENST00000467273 BTG4Q9NY30 223 aa8.19□□□□□ -1.1
PTCD3-207ENST00000467273 UTRNP46939 3433 aa8.19□□□□□ -1.1
PTCD3-207ENST00000467273 IFT172Q9UG01 1749 aa8.19□□□□□ -1.1
PTCD3-207ENST00000467273 RGPD3A6NKT7 1758 aaPredicted RBP8.18□□□□□ -1.1
PTCD3-207ENST00000467273 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 KRTAP9-6A0A140TA67 174 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 ZBBXA8MT70 800 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 PIK3R2O00459 728 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 APBA3O96018 575 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 C1QTNF8P60827 252 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 LINC00114Q6XXX2 140 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 PCDHB11Q9Y5F2 797 aa8.18□□□□□ -1.1
PTCD3-207ENST00000467273 CEP350Q5VT06 3117 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 TRIM37O94972 964 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 CSB-PGBD3P0DP91 1061 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 CHRNA4P43681 627 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 MCM6Q14566 821 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 SLCO4C1Q6ZQN7 724 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 PGBD3Q8N328 593 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 CLUAP1Q96AJ1 413 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 SEMA6BQ9H3T3 888 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 RUBCNLQ9H714 662 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 ANKARQ7Z5J8 1434 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 ALS2Q96Q42 1657 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 CHD4Q14839 1912 aa8.17□□□□□ -1.1
PTCD3-207ENST00000467273 A0A1B0GTH6 734 aa8.16□□□□□ -1.1
PTCD3-207ENST00000467273 RGPD8O14715 1765 aaPredicted RBP8.16□□□□□ -1.1
PTCD3-207ENST00000467273 FBXO45P0C2W1 286 aa8.16□□□□□ -1.1
PTCD3-207ENST00000467273 HOXB4P17483 251 aaPredicted RBP8.16□□□□□ -1.1
PTCD3-207ENST00000467273 WAPLQ7Z5K2 1190 aa8.16□□□□□ -1.1
PTCD3-207ENST00000467273 ABHD17AQ96GS6 310 aa8.16□□□□□ -1.1
PTCD3-207ENST00000467273 ANKRD30BQ9BXX2 1392 aa8.16□□□□□ -1.1
PTCD3-207ENST00000467273 OSBPL3Q9H4L5 887 aa8.16□□□□□ -1.1
PTCD3-207ENST00000467273 TRPM3Q9HCF6 1732 aaPredicted RBP8.16□□□□□ -1.1
PTCD3-207ENST00000467273 CRYBG1Q9Y4K1 1723 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 CAMTA1Q9Y6Y1 1673 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 SPATA31A1Q5TZJ5 1347 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 DOC2BQ14184 412 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 ZMYM1Q5SVZ6 1142 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 FAM182BQ5T319 152 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 HOMEZQ8IX15 550 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 CNKSR1Q969H4 720 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
PTCD3-207ENST00000467273 NOP53Q9NZM5 478 aaKnown RBP8.15□□□□□ -1.1
PTCD3-207ENST00000467273 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-207ENST00000467273 YTHDC2Q9H6S0 1430 aaKnown RBP8.14□□□□□ -1.11
PTCD3-207ENST00000467273 C2CD2LO14523 706 aa8.14□□□□□ -1.11
PTCD3-207ENST00000467273 FGFR3P22607 806 aa8.14□□□□□ -1.11
PTCD3-207ENST00000467273 ITGB7P26010 798 aa8.14□□□□□ -1.11
PTCD3-207ENST00000467273 GTF2E1P29083 439 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-207ENST00000467273 RFC5P40937 340 aa8.14□□□□□ -1.11
PTCD3-207ENST00000467273 EFHC2Q5JST6 749 aa8.14□□□□□ -1.11
PTCD3-207ENST00000467273 GNASQ5JWF2 1037 aa8.14□□□□□ -1.11
PTCD3-207ENST00000467273 ZSCAN10Q96SZ4 725 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-207ENST00000467273 CASZ1Q86V15 1759 aa8.14□□□□□ -1.11
PTCD3-207ENST00000467273 EIF3AQ14152 1382 aaKnown RBP8.13□□□□□ -1.11
PTCD3-207ENST00000467273 GPRASP1Q5JY77 1395 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 PLEKHH1Q9ULM0 1364 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 TRAK2O60296 914 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 CENPCQ03188 943 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 PDE3BQ13370 1112 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 TMEM214Q6NUQ4 689 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms