RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 LGR5O75473 907 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 FAM13AO94988 1023 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 LDHBP07195 334 aaKnown RBP6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 ATF3P18847 181 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 IBSPP21815 317 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 ZNF76P36508 570 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 APLP1P51693 650 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 IGBP1P78318 339 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 MSS51Q4VC12 460 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 OXLD1Q5BKU9 147 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 LDLRAD1Q5T700 205 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 SOGA3Q5TF21 947 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 TRAF7Q6Q0C0 670 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 TPCN2Q8NHX9 752 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 YTHDC1Q96MU7 727 aaKnown RBP6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 GGNBP2Q9H3C7 697 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 ZSWIM4Q9H7M6 989 aa6.78□□□□□ -1.32
HMGB1P4-201ENST00000455362 TTC21BQ7Z4L5 1316 aa6.77□□□□□ -1.32
HMGB1P4-201ENST00000455362 SSH2Q76I76 1423 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 LRRC7Q96NW7 1537 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 ANKRD26Q9UPS8 1709 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 PRPF40AO75400 957 aaKnown RBP6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 DKK1O94907 266 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 CLSTN1O94985 981 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 TNNT2P45379 298 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 MAPK8P45983 427 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 FANCCQ00597 558 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 PSMD2Q13200 908 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 ESCO1Q5FWF5 840 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 NME9Q86XW9 330 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 FAM9BQ8IZU0 186 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 ADAM32Q8TC27 787 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 THAP11Q96EK4 314 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 ORAI2Q96SN7 254 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 PSMD1Q99460 953 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 DUSP9Q99956 384 aaKnown RBP6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 KIF20BQ96Q89 1820 aa6.77□□□□□ -1.33
HMGB1P4-201ENST00000455362 USP6P35125 1406 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 DCCP43146 1447 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 TREHO43280 583 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 PLCB3Q01970 1234 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 FMR1Q06787 632 aaKnown RBP eCLIP6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 EGFLAMQ63HQ2 1017 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 TMC4Q7Z404 712 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 SPSB2Q99619 263 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 METTL14Q9HCE5 456 aaKnown RBP6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 MSH6P52701 1360 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 C1orf167Q5SNV9 1468 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 MAP2P11137 1827 aaKnown RBP6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 TTC21AQ8NDW8 1320 aa6.76□□□□□ -1.33
HMGB1P4-201ENST00000455362 FOXO3O43524 673 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 DXOO77932 396 aaKnown RBP6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 MTHFSP49914 203 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 ATP2B2Q01814 1243 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 ARID5AQ03989 594 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 NAA30Q147X3 362 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 PTPROQ16827 1216 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 TJAP1Q5JTD0 557 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 NYAP1Q6ZVC0 841 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 COG3Q96JB2 828 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 MST1RQ04912 1400 aa6.75□□□□□ -1.33
HMGB1P4-201ENST00000455362 NRKQ7Z2Y5 1582 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 ITGBL1O95965 494 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 FBLN1P23142 703 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 TNNI2P48788 182 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 MMP16P51512 607 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 ANAPC15P60006 121 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 DAB2P98082 770 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 PDE3BQ13370 1112 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 FKBP5Q13451 457 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 CAPN12Q6ZSI9 719 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 GMLQ99445 158 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 PIF1Q9H611 641 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 INPP5FQ9Y2H2 1132 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 PPME1Q9Y570 386 aa6.74□□□□□ -1.33
HMGB1P4-201ENST00000455362 USP31Q70CQ4 1352 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 WEE1P30291 646 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 RBL2Q08999 1139 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 USP4Q13107 963 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 AAMPQ13685 434 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 CC2D2BQ6DHV5 1058 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 KRT28Q7Z3Y7 464 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 VPS37DQ86XT2 251 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 GPATCH3Q96I76 525 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 CITED4Q96RK1 184 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 POLKQ9UBT6 870 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 ADAMTS8Q9UP79 889 aa6.73□□□□□ -1.33
HMGB1P4-201ENST00000455362 INSRP06213 1382 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 AATKQ6ZMQ8 1374 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 PIK3C2AO00443 1686 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 KIF1AQ12756 1690 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 STK10O94804 968 aaKnown RBP6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 HNRNPUQ00839 825 aaKnown RBP eCLIP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms