RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 GTF2E1P29083 439 aaPredicted RBP7.35□□□□□ -1.23
SDC4P-201ENST00000453285 TAF7LQ5H9L4 462 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 CCDC125Q86Z20 511 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 NLGN1Q8N2Q7 840 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 NLRP3Q96P20 1036 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 DOCK2Q92608 1830 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 LRRC37AA6NMS7 1700 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 KIF13BQ9NQT8 1826 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 MROH5Q6ZUA9 1318 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 KLRG2A4D1S0 409 aaPredicted RBP7.34□□□□□ -1.23
SDC4P-201ENST00000453285 ERC2O15083 957 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 CDC45O75419 566 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 PDE8BO95263 885 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 MAP4K4O95819 1239 aaPredicted RBP7.34□□□□□ -1.23
SDC4P-201ENST00000453285 ATP5JP18859 108 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 FGFR2P21802 821 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 SF3B2Q13435 895 aaKnown RBP7.34□□□□□ -1.23
SDC4P-201ENST00000453285 CRY2Q49AN0 593 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 METTL24Q5JXM2 366 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 CNBD1Q8NA66 436 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 CELF1Q92879 486 aaKnown RBP7.34□□□□□ -1.23
SDC4P-201ENST00000453285 CDC5LQ99459 802 aaKnown RBP7.34□□□□□ -1.23
SDC4P-201ENST00000453285 CNNM1Q9NRU3 951 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 STK32BQ9NY57 414 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 AKAP2Q9Y2D5 859 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 CHD4Q14839 1912 aa7.34□□□□□ -1.23
SDC4P-201ENST00000453285 DLEC1Q9Y238 1755 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 LTBP1Q14766 1721 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 CCDC88AQ3V6T2 1871 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 MSH5O43196 834 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 CHMLP26374 656 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 ADORA1P30542 326 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 IGHMBP2P38935 993 aaKnown RBP7.33□□□□□ -1.24
SDC4P-201ENST00000453285 RPS8P62241 208 aaKnown RBP7.33□□□□□ -1.24
SDC4P-201ENST00000453285 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 ANKRD18AQ8IVF6 992 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 HELBQ8NG08 1087 aaPredicted RBP7.33□□□□□ -1.24
SDC4P-201ENST00000453285 RILPL2Q969X0 211 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 XAGE2Q96GT9 111 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 GPATCH3Q96I76 525 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 NEUROD6Q96NK8 337 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 MPHOSPH8Q99549 860 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 BOLA2Q9H3K6 86 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 BSDC1Q9NW68 430 aaPredicted RBP7.33□□□□□ -1.24
SDC4P-201ENST00000453285 SRCAPQ6ZRS2 3230 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 SLX4Q8IY92 1834 aa7.33□□□□□ -1.24
SDC4P-201ENST00000453285 TRIM6-TRIM34B2RNG4 842 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 SNAP23O00161 211 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 TAF5LO75529 589 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 MMP10P09238 476 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 HOXA10P31260 410 aaPredicted RBP7.32□□□□□ -1.24
SDC4P-201ENST00000453285 ST5P78524 1137 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 CHRNDQ07001 517 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 CNTROBQ8N137 903 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.32□□□□□ -1.24
SDC4P-201ENST00000453285 EVI5LQ96CN4 794 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 HAUS7Q99871 368 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 PDGFDQ9GZP0 370 aaPredicted RBP7.32□□□□□ -1.24
SDC4P-201ENST00000453285 MINPP1Q9UNW1 487 aa7.32□□□□□ -1.24
SDC4P-201ENST00000453285 WTIPA6NIX2 430 aaPredicted RBP7.31□□□□□ -1.24
SDC4P-201ENST00000453285 MFAP1P55081 439 aaKnown RBP7.31□□□□□ -1.24
SDC4P-201ENST00000453285 GRAPQ13588 217 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 PUM3Q15397 648 aaKnown RBP7.31□□□□□ -1.24
SDC4P-201ENST00000453285 MSL1Q68DK7 614 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 DDX46Q7L014 1031 aaKnown RBP7.31□□□□□ -1.24
SDC4P-201ENST00000453285 GRAPLQ8TC17 118 aaPredicted RBP7.31□□□□□ -1.24
SDC4P-201ENST00000453285 LPIN2Q92539 896 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 EDC3Q96F86 508 aaKnown RBP7.31□□□□□ -1.24
SDC4P-201ENST00000453285 ZNF512BQ96KM6 892 aaPredicted RBP7.31□□□□□ -1.24
SDC4P-201ENST00000453285 TBC1D32Q96NH3 1257 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 ESYT1Q9BSJ8 1104 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 BRIP1Q9BX63 1249 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 IL25Q9H293 177 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 KIAA1551Q9HCM1 1747 aa7.31□□□□□ -1.24
SDC4P-201ENST00000453285 IRS2Q9Y4H2 1338 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 BRCA1P38398 1863 aaKnown RBP7.3□□□□□ -1.24
SDC4P-201ENST00000453285 LAMA4Q16363 1823 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 NPHP1O15259 732 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 IFIT1P09914 478 aaKnown RBP7.3□□□□□ -1.24
SDC4P-201ENST00000453285 UBE4AQ14139 1066 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 SCARF1Q14162 830 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 CCDC158Q5M9N0 1113 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 SLC51AQ86UW1 340 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 UPF1Q92900 1129 aaKnown RBP eCLIP7.3□□□□□ -1.24
SDC4P-201ENST00000453285 CRAMP1Q96RY5 1269 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 USP26Q9BXU7 913 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 PARP3Q9Y6F1 533 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 NDUFB9Q9Y6M9 179 aa7.3□□□□□ -1.24
SDC4P-201ENST00000453285 SGSM2O43147 1006 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 SRGNP10124 158 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 SLC5A1P13866 664 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 ARID4AP29374 1257 aaPredicted RBP7.29□□□□□ -1.24
SDC4P-201ENST00000453285 MCAMP43121 646 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 PHKA1P46020 1223 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
SDC4P-201ENST00000453285 TTC39AQ5SRH9 613 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 CCDC102BQ68D86 513 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 KBTBD3Q8NAB2 608 aa7.29□□□□□ -1.24
SDC4P-201ENST00000453285 SLC16A10Q8TF71 515 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms