RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 MTERF4Q7Z6M4 381 aaKnown RBP13.34□□□□□ -0.27
SYVN1-204ENST00000449943 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 GUCY1B3Q02153 619 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 COPRSQ9NQ92 184 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
SYVN1-204ENST00000449943 ZNF609O15014 1411 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 TPM3P06753 285 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 MCMDC2Q4G0Z9 681 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
SYVN1-204ENST00000449943 PHKG2P15735 406 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 ZNF165P49910 485 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 SCRN1Q12765 414 aa13.34□□□□□ -0.27
SYVN1-204ENST00000449943 CHST3Q7LGC8 479 aa13.33□□□□□ -0.27
SYVN1-204ENST00000449943 PDIA4P13667 645 aaKnown RBP13.33□□□□□ -0.28
SYVN1-204ENST00000449943 APOBRQ0VD83 1088 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 RESTQ13127 1097 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 A0A087WWV3 80 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.28
SYVN1-204ENST00000449943 RFX5P48382 616 aaPredicted RBP13.33□□□□□ -0.28
SYVN1-204ENST00000449943 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 CABLES1Q8TDN4 633 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
SYVN1-204ENST00000449943 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
SYVN1-204ENST00000449943 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
SYVN1-204ENST00000449943 LRRFIP1Q32MZ4 808 aaKnown RBP13.32□□□□□ -0.28
SYVN1-204ENST00000449943 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
SYVN1-204ENST00000449943 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
SYVN1-204ENST00000449943 A0A0G2JLW4 131 aa13.32□□□□□ -0.28
SYVN1-204ENST00000449943 OVOS2A0A0G2JMS6 1433 aa13.32□□□□□ -0.28
SYVN1-204ENST00000449943 KDM6AO15550 1401 aaPredicted RBP13.32□□□□□ -0.28
SYVN1-204ENST00000449943 TIMM10P62072 90 aa13.32□□□□□ -0.28
SYVN1-204ENST00000449943 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
SYVN1-204ENST00000449943 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 ALDH8A1Q9H2A2 487 aaPredicted RBP13.31□□□□□ -0.28
SYVN1-204ENST00000449943 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 ZNF75DP51815 510 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 HAUS7Q99871 368 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 GOLGA6L19H0YKK7 550 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 FMNL2Q96PY5 1086 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 CLIP2Q9UDT6 1046 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 CFAP45Q9UL16 551 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 CABP4P57796 275 aa13.31□□□□□ -0.28
SYVN1-204ENST00000449943 CCAR1Q8IX12 1150 aaKnown RBP13.3□□□□□ -0.28
SYVN1-204ENST00000449943 ERCC4Q92889 916 aaPredicted RBP13.3□□□□□ -0.28
SYVN1-204ENST00000449943 KBTBD3Q8NAB2 608 aa13.3□□□□□ -0.28
SYVN1-204ENST00000449943 ZNF594Q96JF6 807 aaPredicted RBP13.29□□□□□ -0.28
SYVN1-204ENST00000449943 CCDC94Q9BW85 323 aaPredicted RBP13.29□□□□□ -0.28
SYVN1-204ENST00000449943 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
SYVN1-204ENST00000449943 JCADQ9P266 1359 aa13.29□□□□□ -0.28
SYVN1-204ENST00000449943 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
SYVN1-204ENST00000449943 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
SYVN1-204ENST00000449943 CBX1P83916 185 aa13.29□□□□□ -0.28
SYVN1-204ENST00000449943 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
SYVN1-204ENST00000449943 C11orf57Q6ZUT1 292 aaPredicted RBP13.29□□□□□ -0.28
SYVN1-204ENST00000449943 DHX32Q7L7V1 743 aaKnown RBP13.29□□□□□ -0.28
SYVN1-204ENST00000449943 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
SYVN1-204ENST00000449943 TMX4Q9H1E5 349 aaPredicted RBP13.29□□□□□ -0.28
SYVN1-204ENST00000449943 CCDC73Q6ZRK6 1079 aa13.29□□□□□ -0.28
SYVN1-204ENST00000449943 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
SYVN1-204ENST00000449943 CYP27B1O15528 508 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 ME1P48163 572 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
SYVN1-204ENST00000449943 BECN2A8MW95 431 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 USP28Q96RU2 1077 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 ZBTB3Q9H5J0 574 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 PFKFB2O60825 505 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 GTF2F1P35269 517 aaKnown RBP eCLIP13.28□□□□□ -0.28
SYVN1-204ENST00000449943 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
SYVN1-204ENST00000449943 LRP10Q7Z4F1 713 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 CCDC85AQ96PX6 553 aaPredicted RBP13.28□□□□□ -0.28
SYVN1-204ENST00000449943 GOLPH3LQ9H4A5 285 aa13.28□□□□□ -0.28
SYVN1-204ENST00000449943 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.28
SYVN1-204ENST00000449943 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.28
SYVN1-204ENST00000449943 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.28
SYVN1-204ENST00000449943 PLA2G4DQ86XP0 818 aa13.27□□□□□ -0.28
SYVN1-204ENST00000449943 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.28
SYVN1-204ENST00000449943 MEGF6O75095 1541 aa13.27□□□□□ -0.28
SYVN1-204ENST00000449943 KINO60870 393 aaKnown RBP13.27□□□□□ -0.28
SYVN1-204ENST00000449943 HAND2P61296 217 aa13.27□□□□□ -0.28
SYVN1-204ENST00000449943 TPD52L1Q16890 204 aaPredicted RBP13.27□□□□□ -0.28
SYVN1-204ENST00000449943 LRRC24Q50LG9 513 aa13.27□□□□□ -0.28
SYVN1-204ENST00000449943 SLIT3O75094 1523 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 CTDNEP1O95476 244 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 IFIT1P09914 478 aaKnown RBP13.27□□□□□ -0.29
SYVN1-204ENST00000449943 HSP90AB3PQ58FF7 597 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 TTLL7Q6ZT98 887 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.29
SYVN1-204ENST00000449943 ARID5BQ14865 1188 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.29
SYVN1-204ENST00000449943 RBM43Q6ZSC3 357 aaKnown RBP13.27□□□□□ -0.29
SYVN1-204ENST00000449943 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms