RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 COPRSQ9NQ92 184 aa15.23■□□□□ 0.03
SHC1-210ENST00000448116 TIMM10P62072 90 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 MCMDC2Q4G0Z9 681 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 NRBP1Q9UHY1 535 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 ERBB3P21860 1342 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 PHKG2P15735 406 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 ZNF165P49910 485 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 DDX19AQ9NUU7 478 aaKnown RBP15.22■□□□□ 0.03
SHC1-210ENST00000448116 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
SHC1-210ENST00000448116 ELP1O95163 1332 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 LRMPQ12912 555 aa15.22■□□□□ 0.03
SHC1-210ENST00000448116 KDM3BQ7LBC6 1761 aa15.21■□□□□ 0.03
SHC1-210ENST00000448116 FTOQ9C0B1 505 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHC1-210ENST00000448116 KIF3AQ9Y496 699 aa15.21■□□□□ 0.03
SHC1-210ENST00000448116 COL15A1P39059 1388 aa15.21■□□□□ 0.03
SHC1-210ENST00000448116 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.03
SHC1-210ENST00000448116 APOBRQ0VD83 1088 aa15.21■□□□□ 0.03
SHC1-210ENST00000448116 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.03
SHC1-210ENST00000448116 SNRKQ9NRH2 765 aa15.21■□□□□ 0.03
SHC1-210ENST00000448116 RFX5P48382 616 aaPredicted RBP15.2■□□□□ 0.02
SHC1-210ENST00000448116 CABP4P57796 275 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
SHC1-210ENST00000448116 CLSTN2Q9H4D0 955 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 TPM3P06753 285 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 SCRN1Q12765 414 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
SHC1-210ENST00000448116 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
SHC1-210ENST00000448116 A0A087WWV3 80 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 MTERF4Q7Z6M4 381 aaKnown RBP15.2■□□□□ 0.02
SHC1-210ENST00000448116 FMNL2Q96PY5 1086 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 SPTLC3Q9NUV7 552 aa15.2■□□□□ 0.02
SHC1-210ENST00000448116 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
SHC1-210ENST00000448116 RESTQ13127 1097 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 TSGA10IPQ3SY00 556 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 STOX1Q6ZVD7 989 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 ZNF609O15014 1411 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 A0A0G2JLW4 131 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 HAUS7Q99871 368 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
SHC1-210ENST00000448116 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
SHC1-210ENST00000448116 CNPY4Q8N129 248 aa15.18■□□□□ 0.02
SHC1-210ENST00000448116 ZNF594Q96JF6 807 aaPredicted RBP15.18■□□□□ 0.02
SHC1-210ENST00000448116 RIOK3O14730 519 aaKnown RBP15.18■□□□□ 0.02
SHC1-210ENST00000448116 C16orf45Q96MC5 204 aaPredicted RBP15.18■□□□□ 0.02
SHC1-210ENST00000448116 KBTBD3Q8NAB2 608 aa15.18■□□□□ 0.02
SHC1-210ENST00000448116 ERCC4Q92889 916 aaPredicted RBP15.18■□□□□ 0.02
SHC1-210ENST00000448116 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
SHC1-210ENST00000448116 CCAR1Q8IX12 1150 aaKnown RBP15.17■□□□□ 0.02
SHC1-210ENST00000448116 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
SHC1-210ENST00000448116 ZBTB3Q9H5J0 574 aa15.17■□□□□ 0.02
SHC1-210ENST00000448116 PTPDC1A2A3K4 754 aa15.17■□□□□ 0.02
SHC1-210ENST00000448116 CYP27B1O15528 508 aa15.17■□□□□ 0.02
SHC1-210ENST00000448116 ZNF75DP51815 510 aa15.17■□□□□ 0.02
SHC1-210ENST00000448116 DHX32Q7L7V1 743 aaKnown RBP15.17■□□□□ 0.02
SHC1-210ENST00000448116 PAG1Q9NWQ8 432 aa15.17■□□□□ 0.02
SHC1-210ENST00000448116 FER1L4A9Z1Z3 1794 aa15.17■□□□□ 0.02
SHC1-210ENST00000448116 FKBP4Q02790 459 aaKnown RBP eCLIP15.16■□□□□ 0.02
SHC1-210ENST00000448116 ZNF710Q8N1W2 664 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 CLIP2Q9UDT6 1046 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 ME1P48163 572 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 ZSCAN16Q9H4T2 348 aaPredicted RBP15.16■□□□□ 0.02
SHC1-210ENST00000448116 BCL2L12Q9HB09 334 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 BECN2A8MW95 431 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 KDM6AO15550 1401 aaPredicted RBP15.16■□□□□ 0.02
SHC1-210ENST00000448116 TTLL5Q6EMB2 1281 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 CCDC73Q6ZRK6 1079 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 TTLL7Q6ZT98 887 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 RAB11FIP4Q86YS3 637 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
SHC1-210ENST00000448116 GORABQ5T7V8 394 aa15.15■□□□□ 0.02
SHC1-210ENST00000448116 NSUN7Q8NE18 718 aaKnown RBP15.15■□□□□ 0.02
SHC1-210ENST00000448116 ZNF592Q92610 1267 aa15.15■□□□□ 0.02
SHC1-210ENST00000448116 DCAF5Q96JK2 942 aa15.15■□□□□ 0.02
SHC1-210ENST00000448116 CRYBG1Q9Y4K1 1723 aa15.15■□□□□ 0.02
SHC1-210ENST00000448116 IFIT1P09914 478 aaKnown RBP15.15■□□□□ 0.02
SHC1-210ENST00000448116 HAND2P61296 217 aa15.15■□□□□ 0.02
SHC1-210ENST00000448116 LRRC24Q50LG9 513 aa15.15■□□□□ 0.02
SHC1-210ENST00000448116 RABL6Q3YEC7 729 aaPredicted RBP15.15■□□□□ 0.02
SHC1-210ENST00000448116 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
SHC1-210ENST00000448116 A1BGP04217 495 aa15.14■□□□□ 0.01
SHC1-210ENST00000448116 WASHC4Q2M389 1173 aa15.14■□□□□ 0.01
SHC1-210ENST00000448116 OTUD7BQ6GQQ9 843 aa15.14■□□□□ 0.01
SHC1-210ENST00000448116 PLBD2Q8NHP8 589 aa15.14■□□□□ 0.01
SHC1-210ENST00000448116 PFKFB2O60825 505 aa15.14■□□□□ 0.01
SHC1-210ENST00000448116 KINO60870 393 aaKnown RBP15.14■□□□□ 0.01
SHC1-210ENST00000448116 CBX1P83916 185 aa15.14■□□□□ 0.01
SHC1-210ENST00000448116 C11orf57Q6ZUT1 292 aaPredicted RBP15.14■□□□□ 0.01
SHC1-210ENST00000448116 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
SHC1-210ENST00000448116 ZSCAN25Q6NSZ9 544 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 LRP10Q7Z4F1 713 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 OVOS2A0A0G2JMS6 1433 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 E7EWF7 191 aa15.13■□□□□ 0.01
SHC1-210ENST00000448116 HMGB1P09429 215 aaKnown RBP15.13■□□□□ 0.01
SHC1-210ENST00000448116 TPD52L1Q16890 204 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms