RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 STRN4Q9NRL3 753 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 NRBP1Q9UHY1 535 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 SIPA1L3O60292 1781 aaPredicted RBP17.72■□□□□ 0.43
LINC00839-202ENST00000429940 RESTQ13127 1097 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 PDIA6Q15084 440 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 BRF1Q92994 677 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 DNAJC25Q9H1X3 360 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.43
LINC00839-202ENST00000429940 CPDO75976 1380 aa17.71■□□□□ 0.43
LINC00839-202ENST00000429940 CTIFO43310 598 aaKnown RBP17.71■□□□□ 0.43
LINC00839-202ENST00000429940 NEXNQ0ZGT2 675 aa17.71■□□□□ 0.43
LINC00839-202ENST00000429940 H3BQV1 296 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
LINC00839-202ENST00000429940 CBX1P83916 185 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 IFFO2Q5TF58 517 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 COL15A1P39059 1388 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 COL16A1Q07092 1604 aaPredicted RBP17.7■□□□□ 0.42
LINC00839-202ENST00000429940 NEURL1BA8MQ27 555 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 Q6ZUG5 572 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 ANKRD7Q92527 254 aa17.7■□□□□ 0.42
LINC00839-202ENST00000429940 ATP5JP18859 108 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 EPHA10Q5JZY3 1008 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 DDX11Q96FC9 970 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 ZSCAN16Q9H4T2 348 aaPredicted RBP17.69■□□□□ 0.42
LINC00839-202ENST00000429940 MYL6BP14649 208 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 GCKRQ14397 625 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 C16orf45Q96MC5 204 aaPredicted RBP17.69■□□□□ 0.42
LINC00839-202ENST00000429940 CLIP2Q9UDT6 1046 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 CFAP45Q9UL16 551 aa17.69■□□□□ 0.42
LINC00839-202ENST00000429940 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
LINC00839-202ENST00000429940 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
LINC00839-202ENST00000429940 CAVIN2O95810 425 aa17.68■□□□□ 0.42
LINC00839-202ENST00000429940 MYD88Q99836 296 aa17.68■□□□□ 0.42
LINC00839-202ENST00000429940 BTG4Q9NY30 223 aa17.68■□□□□ 0.42
LINC00839-202ENST00000429940 ZNF609O15014 1411 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 DMTNQ08495 405 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 TNNI3KQ59H18 835 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 CCDC129Q6ZRS4 1044 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 NDUFB9Q9Y6M9 179 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 FPGT-TNNI3KV9GXZ4 949 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 ZSCAN20P17040 1043 aaPredicted RBP17.67■□□□□ 0.42
LINC00839-202ENST00000429940 TFCP2Q12800 502 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 TOM1L2Q6ZVM7 507 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 XAGE3Q8WTP9 111 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 COPRSQ9NQ92 184 aa17.67■□□□□ 0.42
LINC00839-202ENST00000429940 C5P01031 1676 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 SMTNL1A8MU46 457 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 GOLGA6L19H0YKK7 550 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 CYP21A2P08686 494 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 CDC25BP30305 580 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 EVA1CP58658 441 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 FGD1P98174 961 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
LINC00839-202ENST00000429940 DNAJC2Q99543 621 aaKnown RBP17.66■□□□□ 0.42
LINC00839-202ENST00000429940 RFX7Q2KHR2 1363 aa17.66■□□□□ 0.42
LINC00839-202ENST00000429940 TNNT1P13805 278 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 SCRN1Q12765 414 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 UTP14CQ5TAP6 766 aaKnown RBP17.65■□□□□ 0.42
LINC00839-202ENST00000429940 CACTINQ8WUQ7 758 aaKnown RBP17.65■□□□□ 0.42
LINC00839-202ENST00000429940 SEC62Q99442 399 aaKnown RBP17.65■□□□□ 0.42
LINC00839-202ENST00000429940 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
LINC00839-202ENST00000429940 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 CHGBP05060 677 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 SLC39A6Q13433 755 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 CCDC144BQ3MJ40 725 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 MCMDC2Q4G0Z9 681 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 LRRC2Q9BYS8 371 aa17.65■□□□□ 0.42
LINC00839-202ENST00000429940 SMARCC2Q8TAQ2 1214 aa17.64■□□□□ 0.41
LINC00839-202ENST00000429940 LLPHQ9BRT6 129 aaKnown RBP17.64■□□□□ 0.41
LINC00839-202ENST00000429940 SPDYE4A6NLX3 237 aa17.64■□□□□ 0.41
LINC00839-202ENST00000429940 U2AF2P26368 475 aaKnown RBP eCLIP17.64■□□□□ 0.41
LINC00839-202ENST00000429940 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
LINC00839-202ENST00000429940 PTPN12Q05209 780 aaKnown RBP17.64■□□□□ 0.41
LINC00839-202ENST00000429940 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
LINC00839-202ENST00000429940 IQCB1Q15051 598 aa17.64■□□□□ 0.41
LINC00839-202ENST00000429940 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
LINC00839-202ENST00000429940 PAXBP1Q9Y5B6 917 aa17.64■□□□□ 0.41
LINC00839-202ENST00000429940 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.41
LINC00839-202ENST00000429940 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
LINC00839-202ENST00000429940 CTAGE5O15320 804 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 STX1AQ16623 288 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 SARM1Q6SZW1 724 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 C11orf57Q6ZUT1 292 aaPredicted RBP17.63■□□□□ 0.41
LINC00839-202ENST00000429940 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
LINC00839-202ENST00000429940 WDR17Q8IZU2 1322 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 PFKFB2O60825 505 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
LINC00839-202ENST00000429940 FOSBP53539 338 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 NAA16Q6N069 864 aaPredicted RBP17.63■□□□□ 0.41
LINC00839-202ENST00000429940 DDX46Q7L014 1031 aaKnown RBP17.63■□□□□ 0.41
LINC00839-202ENST00000429940 HAUS7Q99871 368 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 DBNDD2Q9BQY9 259 aa17.63■□□□□ 0.41
LINC00839-202ENST00000429940 HSPA1LP34931 641 aa17.62■□□□□ 0.41
LINC00839-202ENST00000429940 SYCP1Q15431 976 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms