RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 CCNYL3P0C7X3 344 aa9.14□□□□□ -0.95
LINC00343-201ENST00000414368 MMP16P51512 607 aa9.14□□□□□ -0.95
LINC00343-201ENST00000414368 SULT6B1Q6IMI4 303 aa9.14□□□□□ -0.95
LINC00343-201ENST00000414368 EPS8L1Q8TE68 723 aa9.14□□□□□ -0.95
LINC00343-201ENST00000414368 KRTAP9-2Q9BYQ4 174 aa9.14□□□□□ -0.95
LINC00343-201ENST00000414368 LRRC37A3O60309 1634 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 EXOC5O00471 708 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 BMP1P13497 986 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 PDE3BQ13370 1112 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 DDB1Q16531 1140 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 DIEXFQ68CQ4 756 aaKnown RBP9.13□□□□□ -0.95
LINC00343-201ENST00000414368 KRT27Q7Z3Y8 459 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 RAPGEF4Q8WZA2 1011 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 NCAPD2Q15021 1401 aa9.13□□□□□ -0.95
LINC00343-201ENST00000414368 SHANK3Q9BYB0 1731 aa9.12□□□□□ -0.95
LINC00343-201ENST00000414368 U2AF1L5P0DN76 240 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-201ENST00000414368 TATP17735 454 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-201ENST00000414368 U2AF1Q01081 240 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00343-201ENST00000414368 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
LINC00343-201ENST00000414368 MARCH10Q8NA82 808 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-201ENST00000414368 ZCRB1Q8TBF4 217 aaKnown RBP9.12□□□□□ -0.95
LINC00343-201ENST00000414368 DDX54Q8TDD1 881 aaKnown RBP9.12□□□□□ -0.95
LINC00343-201ENST00000414368 PSMG3-AS1Q96PY0 264 aa9.12□□□□□ -0.95
LINC00343-201ENST00000414368 CDCA7Q9BWT1 371 aaPredicted RBP9.12□□□□□ -0.95
LINC00343-201ENST00000414368 MAP10Q9P2G4 905 aa9.12□□□□□ -0.95
LINC00343-201ENST00000414368 F12P00748 615 aaPredicted RBP9.11□□□□□ -0.95
LINC00343-201ENST00000414368 TRIM32Q13049 653 aa9.11□□□□□ -0.95
LINC00343-201ENST00000414368 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
LINC00343-201ENST00000414368 NUDCQ9Y266 331 aa9.11□□□□□ -0.95
LINC00343-201ENST00000414368 OVOS2A0A0G2JMS6 1433 aa9.11□□□□□ -0.95
LINC00343-201ENST00000414368 KDRP35968 1356 aa9.11□□□□□ -0.95
LINC00343-201ENST00000414368 KRTAP9-6A0A140TA67 174 aa9.1□□□□□ -0.95
LINC00343-201ENST00000414368 VSIG8P0DPA2 414 aa9.1□□□□□ -0.95
LINC00343-201ENST00000414368 KCNH2Q12809 1159 aa9.1□□□□□ -0.95
LINC00343-201ENST00000414368 EVA1BQ9NVM1 165 aa9.1□□□□□ -0.95
LINC00343-201ENST00000414368 PKD1L3Q7Z443 1732 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 TNS2Q63HR2 1409 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 CYP27B1O15528 508 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 ARMC2Q8NEN0 867 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 PHACTR3Q96KR7 559 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 ARID3AQ99856 593 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 FKBPLQ9UIM3 349 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 SBF2Q86WG5 1849 aa9.09□□□□□ -0.95
LINC00343-201ENST00000414368 PRKAR2BP31323 418 aa9.08□□□□□ -0.96
LINC00343-201ENST00000414368 IRF5Q13568 498 aa9.08□□□□□ -0.96
LINC00343-201ENST00000414368 PLEKHO1Q53GL0 409 aaPredicted RBP9.08□□□□□ -0.96
LINC00343-201ENST00000414368 PTF1AQ7RTS3 328 aa9.08□□□□□ -0.96
LINC00343-201ENST00000414368 MRS2Q9HD23 443 aa9.08□□□□□ -0.96
LINC00343-201ENST00000414368 ADAMTS8Q9UP79 889 aa9.08□□□□□ -0.96
LINC00343-201ENST00000414368 SPG7Q9UQ90 795 aa9.08□□□□□ -0.96
LINC00343-201ENST00000414368 DNMT3AQ9Y6K1 912 aaPredicted RBP9.08□□□□□ -0.96
LINC00343-201ENST00000414368 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
LINC00343-201ENST00000414368 KCNQ2O43526 872 aa9.07□□□□□ -0.96
LINC00343-201ENST00000414368 TRIM37O94972 964 aa9.07□□□□□ -0.96
LINC00343-201ENST00000414368 MTHFSDQ2M296 383 aaKnown RBP9.07□□□□□ -0.96
LINC00343-201ENST00000414368 ZNF530Q6P9A1 599 aaPredicted RBP9.07□□□□□ -0.96
LINC00343-201ENST00000414368 FAM196AQ6ZSG2 479 aa9.07□□□□□ -0.96
LINC00343-201ENST00000414368 CCDC97Q96F63 343 aaPredicted RBP9.07□□□□□ -0.96
LINC00343-201ENST00000414368 ACSBG1Q96GR2 724 aa9.07□□□□□ -0.96
LINC00343-201ENST00000414368 PCDH11XQ9BZA7 1347 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 PCDH11YQ9BZA8 1340 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 VIRMAQ69YN4 1812 aaKnown RBP9.06□□□□□ -0.96
LINC00343-201ENST00000414368 PHKG2P15735 406 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 VAC14Q08AM6 782 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 WDR43Q15061 677 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00343-201ENST00000414368 AMOTQ4VCS5 1084 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 NBPF14Q5TI25 921 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 CCDC146Q8IYE0 955 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
LINC00343-201ENST00000414368 PLEKHF1Q96S99 279 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 C1orf115Q9H7X2 142 aa9.06□□□□□ -0.96
LINC00343-201ENST00000414368 SENP3-EIF4A1A0A087X0R7 540 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 POM121CA8CG34 1229 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 CAPN5O15484 640 aaPredicted RBP9.05□□□□□ -0.96
LINC00343-201ENST00000414368 GPR37L1O60883 481 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 MPRIPQ6WCQ1 1025 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 IFNL2Q8IZJ0 200 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 CALR3Q96L12 384 aaKnown RBP9.05□□□□□ -0.96
LINC00343-201ENST00000414368 UNC93B1Q9H1C4 597 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 DLG5Q8TDM6 1919 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 ITGB4P16144 1822 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 DOT1LQ8TEK3 1739 aa9.05□□□□□ -0.96
LINC00343-201ENST00000414368 ALDH1A1P00352 501 aa9.04□□□□□ -0.96
LINC00343-201ENST00000414368 C1orf141Q5JVX7 400 aa9.04□□□□□ -0.96
LINC00343-201ENST00000414368 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
LINC00343-201ENST00000414368 GPKOWQ92917 476 aaPredicted RBP eCLIP9.04□□□□□ -0.96
LINC00343-201ENST00000414368 SYTL4Q96C24 671 aaPredicted RBP9.04□□□□□ -0.96
LINC00343-201ENST00000414368 LGR6Q9HBX8 967 aa9.04□□□□□ -0.96
LINC00343-201ENST00000414368 TOGARAM1Q9Y4F4 1720 aa9.04□□□□□ -0.96
LINC00343-201ENST00000414368 ZBBXA8MT70 800 aa9.03□□□□□ -0.96
LINC00343-201ENST00000414368 FOXK2Q01167 660 aa9.03□□□□□ -0.96
LINC00343-201ENST00000414368 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
LINC00343-201ENST00000414368 KRTAP1-3Q8IUG1 177 aa9.03□□□□□ -0.96
LINC00343-201ENST00000414368 FAM9BQ8IZU0 186 aa9.03□□□□□ -0.96
LINC00343-201ENST00000414368 GLMNQ92990 594 aa9.03□□□□□ -0.96
LINC00343-201ENST00000414368 SERPINA10Q9UK55 444 aa9.03□□□□□ -0.96
LINC00343-201ENST00000414368 TNS1Q9HBL0 1735 aaKnown RBP9.02□□□□□ -0.96
LINC00343-201ENST00000414368 SCN11AQ9UI33 1791 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 NHSQ6T4R5 1651 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms