RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 UBTFP17480 764 aaKnown RBP5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 SPINK2P20155 84 aa5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 CD68P34810 354 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 TRIM42Q8IWZ5 723 aa5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 ARMC10Q8N2F6 343 aa5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 C7orf69Q9H7B7 122 aa5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 QTRT2Q9H974 415 aaKnown RBP5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 TFIP11Q9UBB9 837 aaKnown RBP5.7□□□□□ -1.5
HMGB3P2-201ENST00000411913 HMX2A2RU54 273 aa5.69□□□□□ -1.5
HMGB3P2-201ENST00000411913 LINC01387J3KSC0 135 aa5.69□□□□□ -1.5
HMGB3P2-201ENST00000411913 UVSSAQ2YD98 709 aa5.69□□□□□ -1.5
HMGB3P2-201ENST00000411913 RNF43Q68DV7 783 aa5.69□□□□□ -1.5
HMGB3P2-201ENST00000411913 GALNT11Q8NCW6 608 aa5.69□□□□□ -1.5
HMGB3P2-201ENST00000411913 DBNDD2Q9BQY9 259 aa5.69□□□□□ -1.5
HMGB3P2-201ENST00000411913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB3P2-201ENST00000411913 WISP1O95388 367 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 CDC25BP30305 580 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 SOX18P35713 384 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 CRTC2Q53ET0 693 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 TXNDC11Q6PKC3 985 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 DTX1Q86Y01 620 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 TREML1Q86YW5 311 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 MYO19Q96H55 970 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 LACRTQ9GZZ8 138 aa5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 MAFBQ9Y5Q3 323 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P2-201ENST00000411913 FOXO3O43524 673 aa5.67□□□□□ -1.5
HMGB3P2-201ENST00000411913 PTK7Q13308 1070 aa5.67□□□□□ -1.5
HMGB3P2-201ENST00000411913 DUOXA2Q1HG44 320 aa5.67□□□□□ -1.5
HMGB3P2-201ENST00000411913 FAM117BQ6P1L5 589 aa5.67□□□□□ -1.5
HMGB3P2-201ENST00000411913 ANKMY2Q8IV38 441 aa5.67□□□□□ -1.5
HMGB3P2-201ENST00000411913 SPACA7Q96KW9 195 aa5.67□□□□□ -1.5
HMGB3P2-201ENST00000411913 KCNF1Q9H3M0 494 aa5.67□□□□□ -1.5
HMGB3P2-201ENST00000411913 PRR19A6NJB7 356 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 SART1O43290 800 aaKnown RBP5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 HOXD8P13378 290 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 CDC27P30260 824 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 CEP135Q66GS9 1140 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 NLRP13Q86W25 1043 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 CLEC10AQ8IUN9 316 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 SHKBP1Q8TBC3 707 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 FAM46AQ96IP4 442 aaKnown RBP5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 MYRFLQ96LU7 910 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 CARD10Q9BWT7 1032 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 KCNK4Q9NYG8 393 aa5.66□□□□□ -1.5
HMGB3P2-201ENST00000411913 FAM177BA6PVY3 158 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L15C9J2P7 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L10C9JJH3 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L13C9JLJ4 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L12C9JPN9 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L11C9JVI0 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L21D6R901 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L18D6R9N7 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L22D6RA61 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L17D6RBQ6 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L19D6RCP7 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L20D6RJB6 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 SMNDC1O75940 238 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 USP17L24Q0WX57 530 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 FAM83CQ9BQN1 747 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 ADGRE2Q9UHX3 823 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 LRFN2Q9ULH4 789 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 KCNMB2Q9Y691 235 aa5.65□□□□□ -1.5
HMGB3P2-201ENST00000411913 WDR64B1ANS9 1081 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 BMP3P12645 472 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 WEE1P30291 646 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 HYAL2Q12891 473 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 FLIIQ13045 1269 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 TPRNQ4KMQ1 711 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 KIAA1211Q6ZU35 1233 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 BEND4Q6ZU67 534 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 FAM20CQ8IXL6 584 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 VRTNQ9H8Y1 702 aa5.64□□□□□ -1.51
HMGB3P2-201ENST00000411913 FAM196BA6NMK8 535 aa5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 FSCN2O14926 492 aa5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 SCNN1AP37088 669 aa5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 ATP11AP98196 1134 aa5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 KLHL23Q8NBE8 558 aa5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 GLMNQ92990 594 aa5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 ANGEL1Q9UNK9 670 aaKnown RBP5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 ARID1BQ8NFD5 2236 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P2-201ENST00000411913 UBAP1LF5GYI3 381 aa5.62□□□□□ -1.51
HMGB3P2-201ENST00000411913 DDX3YO15523 660 aaKnown RBP5.62□□□□□ -1.51
HMGB3P2-201ENST00000411913 KANK4Q5T7N3 995 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P2-201ENST00000411913 ABI1Q8IZP0 508 aa5.62□□□□□ -1.51
HMGB3P2-201ENST00000411913 OR13H1Q8NG92 308 aa5.62□□□□□ -1.51
HMGB3P2-201ENST00000411913 GIMAP7Q8NHV1 300 aa5.62□□□□□ -1.51
HMGB3P2-201ENST00000411913 ATG3Q9NT62 314 aa5.62□□□□□ -1.51
HMGB3P2-201ENST00000411913 COX20Q5RI15 118 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 TTC39BQ5VTQ0 682 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 ANKRD34AQ69YU3 496 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 UBASH3BQ8TF42 649 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 PIK3R5Q8WYR1 880 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 KLHDC7BQ96G42 594 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 MFSD14AQ96MC6 490 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 SEC31BQ9NQW1 1179 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 SH2B1Q9NRF2 756 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 PIM2Q9P1W9 311 aa5.61□□□□□ -1.51
HMGB3P2-201ENST00000411913 GAS2O43903 313 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms