RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 STXBP4Q6ZWJ1 553 aa13.99□□□□□ -0.17
PXMP4-203ENST00000409299 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
PXMP4-203ENST00000409299 GOLGA6L10A0A0M3HER8 536 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 RBM26Q5T8P6 1007 aaKnown RBP13.98□□□□□ -0.17
PXMP4-203ENST00000409299 MRPL50Q8N5N7 158 aaKnown RBP13.98□□□□□ -0.17
PXMP4-203ENST00000409299 EYA1Q99502 592 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 GUCY1B3Q02153 619 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 TSPY2A6NKD2 308 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 MTIF2P46199 727 aaKnown RBP13.98□□□□□ -0.17
PXMP4-203ENST00000409299 SPAG1Q07617 926 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 CETN1Q12798 172 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 PPP4R3AQ6IN85 833 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 CRNKL1Q9BZJ0 848 aaKnown RBP13.98□□□□□ -0.17
PXMP4-203ENST00000409299 ZNF804AQ7Z570 1209 aa13.98□□□□□ -0.17
PXMP4-203ENST00000409299 GTPBP4Q9BZE4 634 aaKnown RBP13.98□□□□□ -0.17
PXMP4-203ENST00000409299 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
PXMP4-203ENST00000409299 CCT2P78371 535 aaKnown RBP13.97□□□□□ -0.17
PXMP4-203ENST00000409299 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 GIGYF2Q6Y7W6 1299 aaKnown RBP13.97□□□□□ -0.17
PXMP4-203ENST00000409299 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 DDX12PQ92771 950 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 KRT23Q9C075 422 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
PXMP4-203ENST00000409299 PDE1AP54750 535 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 KSR2Q6VAB6 950 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 SKAP1Q86WV1 359 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 C8orf34Q49A92 452 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
PXMP4-203ENST00000409299 TRMT1Q9NXH9 659 aaKnown RBP13.97□□□□□ -0.17
PXMP4-203ENST00000409299 ATP8B2P98198 1209 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 ATP2B3Q16720 1220 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 VAT1LQ9HCJ6 419 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
PXMP4-203ENST00000409299 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
PXMP4-203ENST00000409299 ATP7AQ04656 1500 aa13.96□□□□□ -0.17
PXMP4-203ENST00000409299 MFSD6Q6ZSS7 791 aa13.96□□□□□ -0.17
PXMP4-203ENST00000409299 RIMBP2O15034 1052 aa13.96□□□□□ -0.17
PXMP4-203ENST00000409299 NF2P35240 595 aa13.96□□□□□ -0.17
PXMP4-203ENST00000409299 TDRD12Q587J7 1177 aaKnown RBP13.96□□□□□ -0.17
PXMP4-203ENST00000409299 CTR9Q6PD62 1173 aa13.96□□□□□ -0.17
PXMP4-203ENST00000409299 VEZTQ9HBM0 779 aa13.96□□□□□ -0.17
PXMP4-203ENST00000409299 PRKCSHP14314 528 aaPredicted RBP13.96□□□□□ -0.18
PXMP4-203ENST00000409299 RBM25P49756 843 aaKnown RBP13.96□□□□□ -0.18
PXMP4-203ENST00000409299 RAB3GAP1Q15042 981 aa13.96□□□□□ -0.18
PXMP4-203ENST00000409299 DISP1Q96F81 1524 aa13.96□□□□□ -0.18
PXMP4-203ENST00000409299 F13A1P00488 732 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 SSR1P43307 286 aaKnown RBP13.95□□□□□ -0.18
PXMP4-203ENST00000409299 PICALMQ13492 652 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 TFIP11Q9UBB9 837 aaKnown RBP13.95□□□□□ -0.18
PXMP4-203ENST00000409299 MAP3K5Q99683 1374 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 CCDC172P0C7W6 258 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 KRT222Q8N1A0 295 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
PXMP4-203ENST00000409299 INTS4Q96HW7 963 aaKnown RBP13.95□□□□□ -0.18
PXMP4-203ENST00000409299 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
PXMP4-203ENST00000409299 CYP7A1P22680 504 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 SYKP43405 635 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 NOLC1Q14978 699 aaKnown RBP eCLIP13.95□□□□□ -0.18
PXMP4-203ENST00000409299 GRM8O00222 908 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 IRS4O14654 1257 aaPredicted RBP13.95□□□□□ -0.18
PXMP4-203ENST00000409299 ZKSCAN5Q9Y2L8 839 aa13.95□□□□□ -0.18
PXMP4-203ENST00000409299 RAD50Q92878 1312 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 INSRP06213 1382 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 NEBLO76041 1014 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
PXMP4-203ENST00000409299 HAND2P61296 217 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 EYA3Q99504 573 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 APBA3O96018 575 aa13.94□□□□□ -0.18
PXMP4-203ENST00000409299 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
PXMP4-203ENST00000409299 RBM17Q96I25 401 aaKnown RBP13.94□□□□□ -0.18
PXMP4-203ENST00000409299 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 A0A1W2PP64 1363 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 HCLS1P14317 486 aaPredicted RBP13.93□□□□□ -0.18
PXMP4-203ENST00000409299 ATL3Q6DD88 541 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 CPLX3Q8WVH0 158 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 POLR3GO15318 223 aaPredicted RBP13.93□□□□□ -0.18
PXMP4-203ENST00000409299 UBASH3AP57075 661 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 CNBD1Q8NA66 436 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.93□□□□□ -0.18
PXMP4-203ENST00000409299 GNG11P61952 73 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 MCMDC2Q4G0Z9 681 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 ANO6Q4KMQ2 910 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 SPECC1LQ69YQ0 1117 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 IVLP07476 585 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms