RNA–Protein interactions for RNA: ENST00000399621.5

CACNA1C-212, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-212ENST00000399621 STX1AQ16623 288 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 FSIP1Q8NA03 581 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 NDC80O14777 642 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 TMEM67Q5HYA8 995 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 KANK3Q6NY19 840 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 CCDC8Q9H0W5 538 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 EXOC1Q9NV70 894 aa12.6□□□□□ -0.39
CACNA1C-212ENST00000399621 BACH1O14867 736 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 GSDMDP57764 484 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 ARID5AQ03989 594 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 LRRC59Q96AG4 307 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 NEMFO60524 1076 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 CCT2P78371 535 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 TMC6Q7Z403 805 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 HAUS7Q99871 368 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 MCM5P33992 734 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 HSF2BPO75031 334 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
CACNA1C-212ENST00000399621 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 GNL1P36915 607 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 CCDC155Q8N6L0 562 aa12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 ERMNQ8TAM6 284 aa12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 H7C1D1 291 aa12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 IDEP14735 1019 aa12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 RMND1Q9NWS8 449 aa12.58□□□□□ -0.4
CACNA1C-212ENST00000399621 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 GOLGA6L9A6NEM1 432 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 POLR3GO15318 223 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 PSMC4P43686 418 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 KIAA0753Q2KHM9 967 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 USP37Q86T82 979 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 RNF34Q969K3 372 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 DDX19AQ9NUU7 478 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 JAG2Q9Y219 1238 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 LIMCH1Q9UPQ0 1083 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 EHBP1Q8NDI1 1231 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 JADE2Q9NQC1 790 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 TRMT1Q9NXH9 659 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
CACNA1C-212ENST00000399621 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 METAP2P50579 478 aaKnown RBP eCLIP12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 TRAF1Q13077 416 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 GOLIM4O00461 696 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 DNAAF4Q8WXU2 420 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 PKD2L1Q9P0L9 805 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 NOP56O00567 594 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 GJB2P29033 226 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 IQCGQ9H095 443 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-212ENST00000399621 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 MXRA7P84157 204 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 ZYXQ15942 572 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 KRT13P13646 458 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 CYP7A1P22680 504 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 SLC26A6Q9BXS9 759 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 TCOF1Q13428 1488 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 NAP1L3Q99457 506 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 ERCC3P19447 782 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 UBA7P41226 1012 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 GABPAQ06546 454 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
CACNA1C-212ENST00000399621 NCOA7Q8NI08 942 aa12.54□□□□□ -0.4
CACNA1C-212ENST00000399621 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms