RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 PPIP5K2O43314 1243 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 ERCC4Q92889 916 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-211ENST00000399617 ARHGAP29Q52LW3 1261 aa15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 TEX11Q8IYF3 940 aa15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 ZRSR2Q15696 482 aaKnown RBP15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 NOP2P46087 812 aaKnown RBP15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 OTUD6BQ8N6M0 293 aa15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 GPHNQ9NQX3 736 aaPredicted RBP15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 PTPRCP08575 1304 aa15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 SMTNL1A8MU46 457 aa15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
CACNA1C-211ENST00000399617 PLCH2O75038 1416 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 MAP3K11Q16584 847 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 USH1GQ495M9 461 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 SPDYE3A6NKU9 549 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 CETN2P41208 172 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 NIM1KQ8IY84 436 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 NCOA1Q15788 1441 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 ARID5AQ03989 594 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 RTN1Q16799 776 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
CACNA1C-211ENST00000399617 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 MARCKSP29966 332 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 UBE4AQ14139 1066 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 LRSAM1Q6UWE0 723 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 ITGA6P23229 1130 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 FAM47CQ5HY64 1035 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 IVNS1ABPQ9Y6Y0 642 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 DTNBO60941 627 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 HMGB1P09429 215 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 KSR2Q6VAB6 950 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 ESR2Q92731 530 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 PAG1Q9NWQ8 432 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 NDUFB9Q9Y6M9 179 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 TCP10L2B9ZVM9 353 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 ZBTB43O43298 467 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 AATFQ9NY61 560 aaKnown RBP eCLIP15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
CACNA1C-211ENST00000399617 TSPYL6Q8N831 410 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 MCM7P33993 719 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 ALG1Q9BT22 464 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 EXOC1Q9NV70 894 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 RXRBP28702 533 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 Q6ZUG5 572 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 SMCR8Q8TEV9 937 aaPredicted RBP15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 ARMT1Q9H993 441 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 TRMT1Q9NXH9 659 aaKnown RBP15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 NPATQ14207 1427 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 CCP110O43303 1012 aa15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 NMIQ13287 307 aaPredicted RBP15.85■□□□□ 0.13
CACNA1C-211ENST00000399617 NCBP1Q09161 790 aaKnown RBP15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 A2MP01023 1474 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 MCM5P33992 734 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 MRE11P49959 708 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 RRP36Q96EU6 259 aaKnown RBP15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 GADL1Q6ZQY3 521 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 STX6O43752 255 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 SCNN1DP51172 638 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 TIMM10P62072 90 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 DCAF5Q96JK2 942 aa15.84■□□□□ 0.13
CACNA1C-211ENST00000399617 PRDM1O75626 825 aa15.83■□□□□ 0.13
CACNA1C-211ENST00000399617 SSFA2P28290 1259 aa15.83■□□□□ 0.13
CACNA1C-211ENST00000399617 DNAJC10Q8IXB1 793 aa15.83■□□□□ 0.13
CACNA1C-211ENST00000399617 SERPINA10Q9UK55 444 aa15.83■□□□□ 0.13
CACNA1C-211ENST00000399617 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.13
CACNA1C-211ENST00000399617 SCAF11Q99590 1463 aaKnown RBP15.83■□□□□ 0.13
CACNA1C-211ENST00000399617 KRT23Q9C075 422 aa15.83■□□□□ 0.13
CACNA1C-211ENST00000399617 STAT6P42226 847 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 ANKRD2Q9GZV1 360 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 TRAPPC8Q9Y2L5 1435 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 PABPN1LA6NDY0 278 aaKnown RBP15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 MBD4O95243 580 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 RRAGBQ5VZM2 374 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 HMGN5P82970 282 aaKnown RBP15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 RNF169Q8NCN4 708 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 CETN1Q12798 172 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 CCDC102AQ96A19 550 aa15.83■□□□□ 0.12
CACNA1C-211ENST00000399617 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 TRIM47Q96LD4 638 aa15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 PUS7Q96PZ0 661 aaKnown RBP15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 AMPD3Q01432 767 aa15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 TXLNBQ8N3L3 684 aa15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 C6orf50Q9HD87 102 aa15.82■□□□□ 0.12
CACNA1C-211ENST00000399617 VPS36Q86VN1 386 aa15.81■□□□□ 0.12
CACNA1C-211ENST00000399617 TOP1P11387 765 aaKnown RBP15.81■□□□□ 0.12
CACNA1C-211ENST00000399617 TBC1D9Q6ZT07 1266 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms