RNA–Protein interactions for RNA: ENST00000397085.3

RAPGEF4-202, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-202ENST00000397085 YBX3P16989 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 SOX18P35713 384 aa8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 GRIK1P39086 918 aa8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 SETDB1Q15047 1291 aa8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 TREML1Q86YW5 311 aa8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 AGGF1Q8N302 714 aaeCLIP8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 CALR3Q96L12 384 aaKnown RBP8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 CEP41Q9BYV8 373 aa8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 PPP1R12CQ9BZL4 782 aa8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 PPME1Q9Y570 386 aa8.7□□□□□ -1.02
RAPGEF4-202ENST00000397085 WEE1P30291 646 aa8.69□□□□□ -1.02
RAPGEF4-202ENST00000397085 KANK4Q5T7N3 995 aaPredicted RBP8.69□□□□□ -1.02
RAPGEF4-202ENST00000397085 Q6ZS46 218 aa8.69□□□□□ -1.02
RAPGEF4-202ENST00000397085 GP2P55259 537 aaKnown RBP8.68□□□□□ -1.02
RAPGEF4-202ENST00000397085 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
RAPGEF4-202ENST00000397085 KRTAP9-9Q9BYP9 154 aa8.68□□□□□ -1.02
RAPGEF4-202ENST00000397085 KRTAP9-4Q9BYQ2 154 aa8.68□□□□□ -1.02
RAPGEF4-202ENST00000397085 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
RAPGEF4-202ENST00000397085 TGFB1P01137 390 aa8.67□□□□□ -1.02
RAPGEF4-202ENST00000397085 LMOD1P29536 600 aaPredicted RBP8.67□□□□□ -1.02
RAPGEF4-202ENST00000397085 INTS5Q6P9B9 1019 aaKnown RBP8.67□□□□□ -1.02
RAPGEF4-202ENST00000397085 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.67□□□□□ -1.02
RAPGEF4-202ENST00000397085 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
RAPGEF4-202ENST00000397085 FAM177BA6PVY3 158 aa8.66□□□□□ -1.02
RAPGEF4-202ENST00000397085 KIAA1324LA8MWY0 1029 aaPredicted RBP8.66□□□□□ -1.02
RAPGEF4-202ENST00000397085 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
RAPGEF4-202ENST00000397085 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
RAPGEF4-202ENST00000397085 ACAD11Q709F0 780 aa8.66□□□□□ -1.02
RAPGEF4-202ENST00000397085 NLRP13Q86W25 1043 aa8.66□□□□□ -1.02
RAPGEF4-202ENST00000397085 FAM200AQ8TCP9 573 aa8.66□□□□□ -1.02
RAPGEF4-202ENST00000397085 LINC01387J3KSC0 135 aa8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 CD68P34810 354 aaPredicted RBP8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 UVSSAQ2YD98 709 aa8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 FAM117BQ6P1L5 589 aa8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 UBL7Q96S82 380 aaPredicted RBP8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 LRFN2Q9ULH4 789 aa8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 GTF3C3Q9Y5Q9 886 aa8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
RAPGEF4-202ENST00000397085 SMNDC1O75940 238 aaKnown RBP eCLIP8.64□□□□□ -1.03
RAPGEF4-202ENST00000397085 NFIAQ12857 509 aa8.64□□□□□ -1.03
RAPGEF4-202ENST00000397085 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
RAPGEF4-202ENST00000397085 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
RAPGEF4-202ENST00000397085 RNF114Q9Y508 228 aa8.64□□□□□ -1.03
RAPGEF4-202ENST00000397085 KCNMB2Q9Y691 235 aa8.64□□□□□ -1.03
RAPGEF4-202ENST00000397085 HYAL2Q12891 473 aa8.63□□□□□ -1.03
RAPGEF4-202ENST00000397085 CEP135Q66GS9 1140 aa8.63□□□□□ -1.03
RAPGEF4-202ENST00000397085 ARXQ96QS3 562 aa8.63□□□□□ -1.03
RAPGEF4-202ENST00000397085 MED26O95402 600 aa8.62□□□□□ -1.03
RAPGEF4-202ENST00000397085 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
RAPGEF4-202ENST00000397085 CDC27P30260 824 aa8.62□□□□□ -1.03
RAPGEF4-202ENST00000397085 PIK3R5Q8WYR1 880 aa8.62□□□□□ -1.03
RAPGEF4-202ENST00000397085 LACRTQ9GZZ8 138 aa8.62□□□□□ -1.03
RAPGEF4-202ENST00000397085 UBAP1LF5GYI3 381 aa8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 SART1O43290 800 aaKnown RBP8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 COX20Q5RI15 118 aa8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 ZDHHC13Q8IUH4 622 aa8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 FNBP4Q8N3X1 1017 aaPredicted RBP8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 GALNT11Q8NCW6 608 aa8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 C7orf69Q9H7B7 122 aa8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 FNDC3AQ9Y2H6 1198 aaKnown RBP8.61□□□□□ -1.03
RAPGEF4-202ENST00000397085 RFX1P22670 979 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 CDC25BP30305 580 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 SCNN1AP37088 669 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 DUOXA2Q1HG44 320 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 TTC39BQ5VTQ0 682 aaPredicted RBP8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 RNF43Q68DV7 783 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 TXNDC11Q6PKC3 985 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 TRIM42Q8IWZ5 723 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 ARMC10Q8N2F6 343 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 KLHL23Q8NBE8 558 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 DBNDD2Q9BQY9 259 aa8.6□□□□□ -1.03
RAPGEF4-202ENST00000397085 WISP1O95388 367 aa8.59□□□□□ -1.03
RAPGEF4-202ENST00000397085 OR13H1Q8NG92 308 aa8.59□□□□□ -1.03
RAPGEF4-202ENST00000397085 WNT11O96014 354 aa8.58□□□□□ -1.04
RAPGEF4-202ENST00000397085 FKBP5Q13451 457 aaPredicted RBP8.58□□□□□ -1.04
RAPGEF4-202ENST00000397085 C16orf46Q6P387 395 aa8.58□□□□□ -1.04
RAPGEF4-202ENST00000397085 MYRFLQ96LU7 910 aa8.58□□□□□ -1.04
RAPGEF4-202ENST00000397085 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
RAPGEF4-202ENST00000397085 KCNF1Q9H3M0 494 aa8.58□□□□□ -1.04
RAPGEF4-202ENST00000397085 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 HMX2A2RU54 273 aa8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 A6NJR5 290 aa8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 FSCN2O14926 492 aa8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 ATP11AP98196 1134 aa8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 FAM46AQ96IP4 442 aaKnown RBP8.57□□□□□ -1.04
RAPGEF4-202ENST00000397085 SPINK2P20155 84 aa8.56□□□□□ -1.04
RAPGEF4-202ENST00000397085 ETFBKMTQ8IXQ9 262 aa8.56□□□□□ -1.04
RAPGEF4-202ENST00000397085 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
RAPGEF4-202ENST00000397085 SEC31BQ9NQW1 1179 aa8.56□□□□□ -1.04
RAPGEF4-202ENST00000397085 PTPRAP18433 802 aa8.55□□□□□ -1.04
RAPGEF4-202ENST00000397085 CABP4P57796 275 aa8.55□□□□□ -1.04
RAPGEF4-202ENST00000397085 DTX1Q86Y01 620 aa8.55□□□□□ -1.04
RAPGEF4-202ENST00000397085 GIMAP7Q8NHV1 300 aa8.55□□□□□ -1.04
RAPGEF4-202ENST00000397085 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
RAPGEF4-202ENST00000397085 KCNK4Q9NYG8 393 aa8.55□□□□□ -1.04
RAPGEF4-202ENST00000397085 NOVA2Q9UNW9 492 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms