RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 ATP6V1DQ9Y5K8 247 aa13.86□□□□□ -0.19
RAPGEF3-201ENST00000389212 MST1RQ04912 1400 aa13.86□□□□□ -0.19
RAPGEF3-201ENST00000389212 GOLIM4O00461 696 aa13.86□□□□□ -0.19
RAPGEF3-201ENST00000389212 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-201ENST00000389212 ATP5JP18859 108 aa13.86□□□□□ -0.19
RAPGEF3-201ENST00000389212 ZNF609O15014 1411 aa13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 TOM1L2Q6ZVM7 507 aa13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 C17orf53Q8N3J3 647 aaPredicted RBP13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 SCN11AQ9UI33 1791 aa13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 LRRC24Q50LG9 513 aa13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 TAF3Q5VWG9 929 aa13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 CCDC39Q9UFE4 941 aa13.85□□□□□ -0.19
RAPGEF3-201ENST00000389212 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 ADAMTSL3P82987 1691 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 CYP21A2P08686 494 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 LIG1P18858 919 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 CASP7P55210 303 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 SASS6Q6UVJ0 657 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 PLBD2Q8NHP8 589 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 PRDM11Q9NQV5 511 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 ADCY5O95622 1261 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 Q6ZUG5 572 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 PUS3Q9BZE2 481 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 TTC12Q9H892 705 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
RAPGEF3-201ENST00000389212 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 RABL6Q3YEC7 729 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 HS1BP3Q53T59 392 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 CHST3Q7LGC8 479 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 ALS2Q96Q42 1657 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 FOXO4P98177 505 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 CEBPZQ03701 1054 aaKnown RBP13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 STOX1Q6ZVD7 989 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 CKAP2LQ8IYA6 745 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 BRF1Q92994 677 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
RAPGEF3-201ENST00000389212 SNRKQ9NRH2 765 aa13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 KRT85P78386 507 aa13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 AFDNP55196 1824 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 AP5Z1O43299 807 aa13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 HAUS7Q99871 368 aa13.82□□□□□ -0.2
RAPGEF3-201ENST00000389212 MCMDC2Q4G0Z9 681 aa13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 ZNF500O60304 480 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 ZCRB1Q8TBF4 217 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 CWC25Q9NXE8 425 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 SPATA31A3Q5VYP0 1347 aa13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 CCT2P78371 535 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 ANKRD1Q15327 319 aa13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 SPC24Q8NBT2 197 aa13.81□□□□□ -0.2
RAPGEF3-201ENST00000389212 TNS3Q68CZ2 1445 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 HMG20BQ9P0W2 317 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 CADPS2Q86UW7 1296 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 SPATA32Q96LK8 384 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 NCOA5Q9HCD5 579 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 PAG1Q9NWQ8 432 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
RAPGEF3-201ENST00000389212 H7C1W4 665 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 TTLL5Q6EMB2 1281 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 FTOQ9C0B1 505 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 DACT1Q9NYF0 836 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 GOLGA6L4A6NEF3 574 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 SCRN1Q12765 414 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 USPL1Q5W0Q7 1092 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 GTF3C6Q969F1 213 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 COL18A1P39060 1754 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 TERF1P54274 439 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 SYNE4Q8N205 404 aa13.79□□□□□ -0.2
RAPGEF3-201ENST00000389212 A0A1B0GUL7 405 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 H3BQV1 296 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 PDCP20941 246 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 IFFO2Q5TF58 517 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 FAM184AQ8NB25 1140 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 MRC1P22897 1456 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 ARFGEF2Q9Y6D5 1785 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 ADORA1P30542 326 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 RAB11FIP4Q86YS3 637 aa13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-201ENST00000389212 KDM4AO75164 1064 aa13.77□□□□□ -0.2
RAPGEF3-201ENST00000389212 HAND2P61296 217 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms