RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 G3BP1Q13283 466 aaKnown RBP eCLIP12.15□□□□□ -0.47
ARHGEF39-201ENST00000378387 PPP2R5AQ15172 486 aa12.15□□□□□ -0.47
ARHGEF39-201ENST00000378387 ZNF569Q5MCW4 686 aa12.15□□□□□ -0.47
ARHGEF39-201ENST00000378387 TTC19Q6DKK2 380 aaPredicted RBP12.15□□□□□ -0.47
ARHGEF39-201ENST00000378387 CEP57Q86XR8 500 aa12.15□□□□□ -0.47
ARHGEF39-201ENST00000378387 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.47
ARHGEF39-201ENST00000378387 ANXA1P04083 346 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 CCDC172P0C7W6 258 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 CCT5P48643 541 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 MTX1Q13505 466 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 Q6ZUG5 572 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 CHST3Q7LGC8 479 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 BAG1Q99933 345 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 YY1AP1Q9H869 796 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 L2HGDHQ9H9P8 463 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 IMPACTQ9P2X3 320 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 PA2G4Q9UQ80 394 aaKnown RBP12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 PTCH1Q13635 1447 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 APOBRQ0VD83 1088 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 PPP2R2CQ9Y2T4 447 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 CEP83Q9Y592 693 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 MCTP2Q6DN12 878 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 WDR24Q96S15 920 aa12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
ARHGEF39-201ENST00000378387 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 SHTN1A0MZ66 631 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 TAF7Q15545 349 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 RUFY1Q96T51 708 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 ECHDC1Q9NTX5 307 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 ZRANB2O95218 330 aaKnown RBP eCLIP12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 PPFIBP1Q86W92 1011 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 FAM135BQ49AJ0 1406 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 SSBP05455 408 aaKnown RBP eCLIP12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 DHX40Q8IX18 779 aaKnown RBP12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 SIRT1Q96EB6 747 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 MPHOSPH8Q99549 860 aa12.13□□□□□ -0.47
ARHGEF39-201ENST00000378387 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 SLC27A2O14975 620 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 TXLNAP40222 546 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 MMS22LQ6ZRQ5 1243 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 AFAP1L1Q8TED9 768 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 ESF1Q9H501 851 aaKnown RBP12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 ABCB6Q9NP58 842 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 SLC52A1Q9NWF4 448 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 MKRN1Q9UHC7 482 aaKnown RBP12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 TUBB4AP04350 444 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 FBXW10Q5XX13 1052 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 NEK1Q96PY6 1258 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 GOLPH3LQ9H4A5 285 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 SUFUQ9UMX1 484 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 CTAGE15A4D2H0 777 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 ATP8B1O43520 1251 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 CTAGE8P0CG41 777 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 CTAGE6Q86UF2 777 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 CTAGE4Q8IX94 777 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 GBP3Q9H0R5 595 aa12.12□□□□□ -0.47
ARHGEF39-201ENST00000378387 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 CDR1P51861 262 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 RPAINQ86UA6 219 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 RABGGTAQ92696 567 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 FUT8Q9BYC5 575 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 ATP2C2O75185 946 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 INPP5BP32019 993 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 TADA2BQ86TJ2 420 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 TICAM2Q86XR7 235 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 REXO1L1PQ8IX06 675 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 SAMM50Q9Y512 469 aa12.11□□□□□ -0.47
ARHGEF39-201ENST00000378387 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 ZEB2O60315 1214 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 NEBLO76041 1014 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 LONRF3Q496Y0 759 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 SEC62Q99442 399 aaKnown RBP12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 CAPN7Q9Y6W3 813 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 PHLPP2Q6ZVD8 1323 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 ZMYND10O75800 440 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 NF2P35240 595 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 PDE6BP35913 854 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 NDUFA8P51970 172 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 AMPHP49418 695 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms