RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 PAG1Q9NWQ8 432 aa20.24■□□□□ 0.83
HLA-A-202ENST00000376806 RBM8AQ9Y5S9 174 aaKnown RBP20.24■□□□□ 0.83
HLA-A-202ENST00000376806 AKAP11Q9UKA4 1901 aa20.23■□□□□ 0.83
HLA-A-202ENST00000376806 NECTIN1Q15223 517 aa20.23■□□□□ 0.83
HLA-A-202ENST00000376806 ZNF589Q86UQ0 364 aaPredicted RBP20.23■□□□□ 0.83
HLA-A-202ENST00000376806 UTP14AQ9BVJ6 771 aaKnown RBP20.23■□□□□ 0.83
HLA-A-202ENST00000376806 CWC22Q9HCG8 908 aaKnown RBP20.23■□□□□ 0.83
HLA-A-202ENST00000376806 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
HLA-A-202ENST00000376806 TRIM37O94972 964 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 IFIT1P09914 478 aaKnown RBP20.22■□□□□ 0.83
HLA-A-202ENST00000376806 LDHAL6AQ6ZMR3 332 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 ABCC12Q96J65 1359 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 COL24A1Q17RW2 1714 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 GOLIM4O00461 696 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 ADORA1P30542 326 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 CUL4AQ13619 759 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 METTL24Q5JXM2 366 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 TICAM2Q86XR7 235 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 ZGPATQ8N5A5 531 aaKnown RBP20.22■□□□□ 0.83
HLA-A-202ENST00000376806 XAGE2Q96GT9 111 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 TTC14Q96N46 770 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 ZNF652Q9Y2D9 606 aa20.22■□□□□ 0.83
HLA-A-202ENST00000376806 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
HLA-A-202ENST00000376806 NTSR2O95665 410 aa20.21■□□□□ 0.83
HLA-A-202ENST00000376806 KCNJ4P48050 445 aa20.21■□□□□ 0.83
HLA-A-202ENST00000376806 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
HLA-A-202ENST00000376806 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
HLA-A-202ENST00000376806 CNNM1Q9NRU3 951 aa20.21■□□□□ 0.83
HLA-A-202ENST00000376806 NIP7Q9Y221 180 aaKnown RBP eCLIP20.21■□□□□ 0.836e-6■□□□□ 11.1
HLA-A-202ENST00000376806 ATP2B3Q16720 1220 aa20.2■□□□□ 0.82
HLA-A-202ENST00000376806 FAM177BA6PVY3 158 aa20.2■□□□□ 0.82
HLA-A-202ENST00000376806 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
HLA-A-202ENST00000376806 CASTP20810 708 aaKnown RBP20.2■□□□□ 0.82
HLA-A-202ENST00000376806 SSFA2P28290 1259 aa20.2■□□□□ 0.82
HLA-A-202ENST00000376806 CCDC158Q5M9N0 1113 aa20.2■□□□□ 0.82
HLA-A-202ENST00000376806 TTC39AQ5SRH9 613 aa20.2■□□□□ 0.82
HLA-A-202ENST00000376806 TM6SF1Q9BZW5 370 aa20.2■□□□□ 0.82
HLA-A-202ENST00000376806 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
HLA-A-202ENST00000376806 C4AP0C0L4 1744 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 RPAP1Q9BWH6 1393 aaPredicted RBP20.19■□□□□ 0.82
HLA-A-202ENST00000376806 TAF5LO75529 589 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 ZKSCAN1P17029 563 aaPredicted RBP20.19■□□□□ 0.82
HLA-A-202ENST00000376806 KCNQ4P56696 695 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 NUCB2P80303 420 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 GORABQ5T7V8 394 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 VGLL2Q8N8G2 317 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 JAKMIP1Q96N16 626 aaKnown RBP20.19■□□□□ 0.82
HLA-A-202ENST00000376806 GBP4Q96PP9 640 aa20.19■□□□□ 0.82
HLA-A-202ENST00000376806 RTL9Q8NET4 1388 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 DDX11L8A8MPP1 907 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 SLC27A2O14975 620 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 CHGBP05060 677 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 ADCK5Q3MIX3 580 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 CYP2E1P05181 493 aaPredicted RBP20.18■□□□□ 0.82
HLA-A-202ENST00000376806 MCMDC2Q4G0Z9 681 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 CLEC4GQ6UXB4 293 aa20.18■□□□□ 0.82
HLA-A-202ENST00000376806 INTS4Q96HW7 963 aaKnown RBP20.18■□□□□ 0.82
HLA-A-202ENST00000376806 MYO5AQ9Y4I1 1855 aaKnown RBP20.17■□□□□ 0.82
HLA-A-202ENST00000376806 AK2P54819 239 aa20.17■□□□□ 0.82
HLA-A-202ENST00000376806 RNF20Q5VTR2 975 aa20.17■□□□□ 0.82
HLA-A-202ENST00000376806 SEC62Q99442 399 aaKnown RBP20.17■□□□□ 0.82
HLA-A-202ENST00000376806 ZSWIM6Q9HCJ5 1215 aa20.17■□□□□ 0.82
HLA-A-202ENST00000376806 HSP90B1P14625 803 aaKnown RBP20.16■□□□□ 0.82
HLA-A-202ENST00000376806 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
HLA-A-202ENST00000376806 CCDC129Q6ZRS4 1044 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 HMG20BQ9P0W2 317 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 RGL2O15211 777 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 CPA1P15085 419 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 GSE1Q14687 1217 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 CYP46A1Q9Y6A2 500 aa20.16■□□□□ 0.82
HLA-A-202ENST00000376806 MROH5Q6ZUA9 1318 aa20.15■□□□□ 0.82
HLA-A-202ENST00000376806 PDE8BO95263 885 aa20.15■□□□□ 0.82
HLA-A-202ENST00000376806 CCDC152Q4G0S7 254 aa20.15■□□□□ 0.82
HLA-A-202ENST00000376806 ZMYM1Q5SVZ6 1142 aa20.15■□□□□ 0.82
HLA-A-202ENST00000376806 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
HLA-A-202ENST00000376806 DOCK2Q92608 1830 aa20.14■□□□□ 0.82
HLA-A-202ENST00000376806 SCARF1Q14162 830 aa20.14■□□□□ 0.81
HLA-A-202ENST00000376806 CLEC17AQ6ZS10 378 aa20.14■□□□□ 0.81
HLA-A-202ENST00000376806 RUFY3Q7L099 469 aa20.14■□□□□ 0.81
HLA-A-202ENST00000376806 COL4A1P02462 1669 aa20.14■□□□□ 0.81
HLA-A-202ENST00000376806 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
HLA-A-202ENST00000376806 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
HLA-A-202ENST00000376806 PKP1Q13835 747 aa20.13■□□□□ 0.81
HLA-A-202ENST00000376806 PDRG1Q9NUG6 133 aa20.13■□□□□ 0.81
HLA-A-202ENST00000376806 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
HLA-A-202ENST00000376806 U3KPZ7 1027 aaPredicted RBP20.13■□□□□ 0.81
HLA-A-202ENST00000376806 TAF1P21675 1872 aa20.13■□□□□ 0.81
HLA-A-202ENST00000376806 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
HLA-A-202ENST00000376806 PSMA5P28066 241 aa20.13■□□□□ 0.81
HLA-A-202ENST00000376806 LIMCH1Q9UPQ0 1083 aa20.13■□□□□ 0.81
HLA-A-202ENST00000376806 PUM3Q15397 648 aaKnown RBP20.12■□□□□ 0.81
HLA-A-202ENST00000376806 TSGA10IPQ3SY00 556 aa20.12■□□□□ 0.81
HLA-A-202ENST00000376806 ZNF512BQ96KM6 892 aaPredicted RBP20.12■□□□□ 0.81
HLA-A-202ENST00000376806 SEC31BQ9NQW1 1179 aa20.12■□□□□ 0.81
HLA-A-202ENST00000376806 MAST3O60307 1309 aa20.12■□□□□ 0.81
HLA-A-202ENST00000376806 ZAP70P43403 619 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms