RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 SPECC1Q5M775 1068 aa13.49□□□□□ -0.25
PTPN1-201ENST00000371621 KIF14Q15058 1648 aa13.49□□□□□ -0.25
PTPN1-201ENST00000371621 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
PTPN1-201ENST00000371621 FANCCQ00597 558 aa13.49□□□□□ -0.25
PTPN1-201ENST00000371621 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
PTPN1-201ENST00000371621 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
PTPN1-201ENST00000371621 CYP2E1P05181 493 aaPredicted RBP13.48□□□□□ -0.25
PTPN1-201ENST00000371621 ACTN3Q08043 901 aaPredicted RBP13.48□□□□□ -0.25
PTPN1-201ENST00000371621 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
PTPN1-201ENST00000371621 ZNHIT6Q9NWK9 470 aaKnown RBP13.48□□□□□ -0.25
PTPN1-201ENST00000371621 NUP160Q12769 1436 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 PLA2G4AP47712 749 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 GNGT1P63211 74 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 MTX1Q13505 466 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPN1-201ENST00000371621 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 PIK3R5Q8WYR1 880 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
PTPN1-201ENST00000371621 SNX14Q9Y5W7 946 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 AP5Z1O43299 807 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 CC2D1AQ6P1N0 951 aaPredicted RBP13.48□□□□□ -0.25
PTPN1-201ENST00000371621 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 CABP1Q9NZU7 370 aa13.48□□□□□ -0.25
PTPN1-201ENST00000371621 ARHGAP5Q13017 1502 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
PTPN1-201ENST00000371621 TUBB4AP04350 444 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 CTCFLQ8NI51 663 aaPredicted RBP13.47□□□□□ -0.25
PTPN1-201ENST00000371621 STX17P56962 302 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 C8orf76Q96K31 380 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 RBM28Q9NW13 759 aaKnown RBP13.47□□□□□ -0.25
PTPN1-201ENST00000371621 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 STIM1Q13586 685 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 NEDD9Q14511 834 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
PTPN1-201ENST00000371621 HSF2BPO75031 334 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 PIK3C2GO75747 1445 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 CCDC196A0A1B0GTZ2 297 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 JAK2O60674 1132 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 MCM3P25205 808 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 SIRT2Q8IXJ6 389 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 KIF1BPQ96EK5 621 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 MRFAP1L1Q96HT8 127 aa13.46□□□□□ -0.25
PTPN1-201ENST00000371621 CALR3Q96L12 384 aaKnown RBP13.46□□□□□ -0.25
PTPN1-201ENST00000371621 RNF40O75150 1001 aa13.46□□□□□ -0.26
PTPN1-201ENST00000371621 SYKP43405 635 aa13.46□□□□□ -0.26
PTPN1-201ENST00000371621 ENOX2Q16206 610 aaKnown RBP13.46□□□□□ -0.26
PTPN1-201ENST00000371621 SPATS2LQ9NUQ6 558 aaKnown RBP13.46□□□□□ -0.26
PTPN1-201ENST00000371621 EIF4E1BA6NMX2 242 aaKnown RBP13.45□□□□□ -0.26
PTPN1-201ENST00000371621 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
PTPN1-201ENST00000371621 CHST3Q7LGC8 479 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 TDRD7Q8NHU6 1098 aaKnown RBP13.45□□□□□ -0.26
PTPN1-201ENST00000371621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTPN1-201ENST00000371621 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 KCTD16Q68DU8 428 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 PSMB7Q99436 277 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 TXLNAP40222 546 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 SLC20A2Q08357 652 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 ME3Q16798 604 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 PACS2Q86VP3 889 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 KIRREL3Q8IZU9 778 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 DHX58Q96C10 678 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 YY1AP1Q9H869 796 aa13.45□□□□□ -0.26
PTPN1-201ENST00000371621 GOLGA6BA6NDN3 693 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
PTPN1-201ENST00000371621 BRD3Q15059 726 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 IQCEQ6IPM2 695 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 B4GALNT4Q76KP1 1039 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 IFT81Q8WYA0 676 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 OTUD7BQ6GQQ9 843 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 TRIM6Q9C030 488 aaPredicted RBP13.44□□□□□ -0.26
PTPN1-201ENST00000371621 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 CCDC141Q6ZP82 1450 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 PPP1R42Q7Z4L9 355 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 CPLX4Q7Z7G2 160 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 FTOQ9C0B1 505 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPN1-201ENST00000371621 ZSCAN16Q9H4T2 348 aaPredicted RBP13.44□□□□□ -0.26
PTPN1-201ENST00000371621 POLD4Q9HCU8 107 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 PPP2R2CQ9Y2T4 447 aa13.44□□□□□ -0.26
PTPN1-201ENST00000371621 CUL4AQ13619 759 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 SLFNL1Q499Z3 407 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 PHACTR3Q96KR7 559 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 ABCB6Q9NP58 842 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
PTPN1-201ENST00000371621 DACH1Q9UI36 760 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 POLR3AO14802 1390 aaPredicted RBP13.43□□□□□ -0.26
PTPN1-201ENST00000371621 SND1Q7KZF4 910 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTPN1-201ENST00000371621 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 FAM169AQ9Y6X4 670 aa13.43□□□□□ -0.26
PTPN1-201ENST00000371621 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms