RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 RABL6Q3YEC7 729 aaPredicted RBP13.98□□□□□ -0.17
PDE6C-201ENST00000371447 COL15A1P39059 1388 aa13.98□□□□□ -0.17
PDE6C-201ENST00000371447 CCDC191Q8NCU4 936 aa13.98□□□□□ -0.17
PDE6C-201ENST00000371447 GREM2Q9H772 168 aa13.98□□□□□ -0.17
PDE6C-201ENST00000371447 RPS6KB1P23443 525 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
PDE6C-201ENST00000371447 APOBRQ0VD83 1088 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 HAUS7Q99871 368 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 IQSEC3Q9UPP2 1182 aaPredicted RBP13.97□□□□□ -0.17
PDE6C-201ENST00000371447 OVOS2A0A0G2JMS6 1433 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 TRPM3Q9HCF6 1732 aaPredicted RBP13.97□□□□□ -0.17
PDE6C-201ENST00000371447 GOLGA6L4A6NEF3 574 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 IDH1O75874 414 aaKnown RBP13.97□□□□□ -0.17
PDE6C-201ENST00000371447 MBD3O95983 291 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 H3BQV1 296 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 CCDC158Q5M9N0 1113 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 IFFO2Q5TF58 517 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 KBTBD3Q8NAB2 608 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 XAGE2Q96GT9 111 aa13.97□□□□□ -0.17
PDE6C-201ENST00000371447 ZAP70P43403 619 aa13.96□□□□□ -0.17
PDE6C-201ENST00000371447 TOB2Q14106 344 aaPredicted RBP13.96□□□□□ -0.17
PDE6C-201ENST00000371447 BICDL1Q6ZP65 573 aa13.96□□□□□ -0.17
PDE6C-201ENST00000371447 FAM184AQ8NB25 1140 aa13.96□□□□□ -0.17
PDE6C-201ENST00000371447 STRCP1A6NGW2 1772 aa13.96□□□□□ -0.17
PDE6C-201ENST00000371447 SLC4A9Q96Q91 983 aa13.96□□□□□ -0.18
PDE6C-201ENST00000371447 ZNF609O15014 1411 aa13.96□□□□□ -0.18
PDE6C-201ENST00000371447 ITGA6P23229 1130 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 LRSAM1Q6UWE0 723 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 STOX1Q6ZVD7 989 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 CPDO75976 1380 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 ZNF445P59923 1031 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 ZSCAN31Q96LW9 406 aaPredicted RBP13.95□□□□□ -0.18
PDE6C-201ENST00000371447 TSPY26PQ9H489 355 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 COL5A2P05997 1499 aaPredicted RBP13.95□□□□□ -0.18
PDE6C-201ENST00000371447 FAM182BQ5T319 152 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 CKAP2LQ8IYA6 745 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
PDE6C-201ENST00000371447 SH2B1Q9NRF2 756 aaPredicted RBP13.95□□□□□ -0.18
PDE6C-201ENST00000371447 M0R2C6 588 aa13.94□□□□□ -0.18
PDE6C-201ENST00000371447 IRS4O14654 1257 aaPredicted RBP13.94□□□□□ -0.18
PDE6C-201ENST00000371447 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
PDE6C-201ENST00000371447 OSBP2Q969R2 916 aa13.94□□□□□ -0.18
PDE6C-201ENST00000371447 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
PDE6C-201ENST00000371447 ZNF830Q96NB3 372 aaPredicted RBP13.94□□□□□ -0.18
PDE6C-201ENST00000371447 OTUD7BQ6GQQ9 843 aa13.93□□□□□ -0.18
PDE6C-201ENST00000371447 FTOQ9C0B1 505 aaKnown RBP eCLIP13.93□□□□□ -0.18
PDE6C-201ENST00000371447 C5P01031 1676 aa13.93□□□□□ -0.18
PDE6C-201ENST00000371447 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
PDE6C-201ENST00000371447 HSPD1P10809 573 aaKnown RBP13.93□□□□□ -0.18
PDE6C-201ENST00000371447 RXRAP19793 462 aa13.93□□□□□ -0.18
PDE6C-201ENST00000371447 MSNP26038 577 aaKnown RBP13.93□□□□□ -0.18
PDE6C-201ENST00000371447 CCDC173Q0VFZ6 552 aa13.93□□□□□ -0.18
PDE6C-201ENST00000371447 ATP2B3Q16720 1220 aa13.93□□□□□ -0.18
PDE6C-201ENST00000371447 ATP6V1DQ9Y5K8 247 aa13.93□□□□□ -0.18
PDE6C-201ENST00000371447 TM6SF1Q9BZW5 370 aa13.92□□□□□ -0.18
PDE6C-201ENST00000371447 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
PDE6C-201ENST00000371447 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
PDE6C-201ENST00000371447 CCDC144CPQ8IYA2 1237 aa13.92□□□□□ -0.18
PDE6C-201ENST00000371447 TOMM22Q9NS69 142 aa13.92□□□□□ -0.18
PDE6C-201ENST00000371447 DENND2AQ9ULE3 1009 aa13.92□□□□□ -0.18
PDE6C-201ENST00000371447 MAST3O60307 1309 aa13.92□□□□□ -0.18
PDE6C-201ENST00000371447 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
PDE6C-201ENST00000371447 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
PDE6C-201ENST00000371447 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
PDE6C-201ENST00000371447 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
PDE6C-201ENST00000371447 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 SEC31BQ9NQW1 1179 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 ALS2Q96Q42 1657 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 MED23Q9ULK4 1368 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 KIF1AQ12756 1690 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 KCNQ2O43526 872 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 TTC6Q86TZ1 520 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 ISCA1Q9BUE6 129 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 GJB4Q9NTQ9 266 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 DCCP43146 1447 aa13.91□□□□□ -0.18
PDE6C-201ENST00000371447 SCRN1Q12765 414 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 SLC9C2Q5TAH2 1124 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 ZBTB38Q8NAP3 1195 aaPredicted RBP13.9□□□□□ -0.18
PDE6C-201ENST00000371447 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 ANKRD18BA2A2Z9 1011 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
PDE6C-201ENST00000371447 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
PDE6C-201ENST00000371447 CHMP4CQ96CF2 233 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 A0A087WWV3 80 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 E7EWF7 191 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 LIG1P18858 919 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 UBE2HP62256 183 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 KRT85P78386 507 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 DDB1Q16531 1140 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 MAP3K15Q6ZN16 1313 aa13.9□□□□□ -0.18
PDE6C-201ENST00000371447 CYP19A1P11511 503 aaPredicted RBP13.89□□□□□ -0.19
PDE6C-201ENST00000371447 PHKA1P46020 1223 aa13.89□□□□□ -0.19
PDE6C-201ENST00000371447 HMG20BQ9P0W2 317 aa13.89□□□□□ -0.19
PDE6C-201ENST00000371447 TCHHQ07283 1943 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms