RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 AKR1B10O60218 316 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 ASIC1P78348 528 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 CEP112Q8N8E3 955 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 PPM1EQ8WY54 764 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 MEIS3Q99687 375 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 TTC21AQ8NDW8 1320 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 KIF2AO00139 706 aaPredicted RBP20.72■□□□□ 0.91
SNX27-202ENST00000368841 GPIHBP1Q8IV16 184 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 TCHPQ9BT92 498 aa20.71■□□□□ 0.91
SNX27-202ENST00000368841 NIP7Q9Y221 180 aaKnown RBP eCLIP20.71■□□□□ 0.91
SNX27-202ENST00000368841 MICALCLQ6ZW33 695 aa20.71■□□□□ 0.91
SNX27-202ENST00000368841 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.9
SNX27-202ENST00000368841 KARSQ15046 597 aaKnown RBP20.7■□□□□ 0.9
SNX27-202ENST00000368841 DNAJC21Q5F1R6 531 aaKnown RBP20.7■□□□□ 0.9
SNX27-202ENST00000368841 USP48Q86UV5 1035 aa20.7■□□□□ 0.9
SNX27-202ENST00000368841 MAGEB6Q8N7X4 407 aa20.7■□□□□ 0.9
SNX27-202ENST00000368841 PSMC4P43686 418 aa20.7■□□□□ 0.9
SNX27-202ENST00000368841 ANKRD13DQ6ZTN6 518 aa20.7■□□□□ 0.9
SNX27-202ENST00000368841 LDHCP07864 332 aa20.7■□□□□ 0.9
SNX27-202ENST00000368841 TMX3Q96JJ7 454 aa20.7■□□□□ 0.9
SNX27-202ENST00000368841 HARSP12081 509 aaKnown RBP20.7■□□□□ 0.9
SNX27-202ENST00000368841 GSTO1P78417 241 aa20.7■□□□□ 0.9
SNX27-202ENST00000368841 LRRC59Q96AG4 307 aaKnown RBP20.7■□□□□ 0.9
SNX27-202ENST00000368841 ACEP12821 1306 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
SNX27-202ENST00000368841 DNAJC25Q9H1X3 360 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 COPS6Q7L5N1 327 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 RRP9O43818 475 aaKnown RBP20.69■□□□□ 0.9
SNX27-202ENST00000368841 SPAG5Q96R06 1193 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 TIAM1Q13009 1591 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 SDSP20132 328 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 NAA16Q6N069 864 aaPredicted RBP20.69■□□□□ 0.9
SNX27-202ENST00000368841 NOS1P29475 1434 aa20.69■□□□□ 0.9
SNX27-202ENST00000368841 GSDMDP57764 484 aa20.68■□□□□ 0.9
SNX27-202ENST00000368841 RBM8AQ9Y5S9 174 aaKnown RBP20.68■□□□□ 0.9
SNX27-202ENST00000368841 PIK3R4Q99570 1358 aa20.68■□□□□ 0.9
SNX27-202ENST00000368841 SNRPA1P09661 255 aaKnown RBP20.68■□□□□ 0.9
SNX27-202ENST00000368841 NMIQ13287 307 aaPredicted RBP20.68■□□□□ 0.9
SNX27-202ENST00000368841 SLC9C2Q5TAH2 1124 aa20.68■□□□□ 0.9
SNX27-202ENST00000368841 CCDC160A6NGH7 325 aa20.68■□□□□ 0.9
SNX27-202ENST00000368841 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 MCM6Q14566 821 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 CCDC25Q86WR0 208 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 MRRFQ96E11 262 aaKnown RBP20.67■□□□□ 0.9
SNX27-202ENST00000368841 ZSCAN22P10073 491 aaPredicted RBP20.67■□□□□ 0.9
SNX27-202ENST00000368841 FERMT1Q9BQL6 677 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 TNNI2P48788 182 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 DNM1Q05193 864 aaKnown RBP20.67■□□□□ 0.9
SNX27-202ENST00000368841 APOBRQ0VD83 1088 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 DNAI1Q9UI46 699 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 ABCC5O15440 1437 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 UBE2HP62256 183 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 RHPN1Q8TCX5 695 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
SNX27-202ENST00000368841 FAM13AO94988 1023 aa20.66■□□□□ 0.9
SNX27-202ENST00000368841 EIF6P56537 245 aaKnown RBP20.66■□□□□ 0.9
SNX27-202ENST00000368841 MPHOSPH6Q99547 160 aaKnown RBP20.66■□□□□ 0.9
SNX27-202ENST00000368841 IQCGQ9H095 443 aaKnown RBP20.66■□□□□ 0.9
SNX27-202ENST00000368841 PLCB3Q01970 1234 aa20.66■□□□□ 0.9
SNX27-202ENST00000368841 ERMNQ8TAM6 284 aa20.66■□□□□ 0.9
SNX27-202ENST00000368841 DISP3Q9P2K9 1392 aa20.66■□□□□ 0.9
SNX27-202ENST00000368841 DTNBO60941 627 aa20.65■□□□□ 0.9
SNX27-202ENST00000368841 FBF1Q8TES7 1133 aa20.65■□□□□ 0.9
SNX27-202ENST00000368841 KRT23Q9C075 422 aa20.65■□□□□ 0.9
SNX27-202ENST00000368841 CCDC155Q8N6L0 562 aa20.65■□□□□ 0.9
SNX27-202ENST00000368841 GJA3Q9Y6H8 435 aa20.65■□□□□ 0.9
SNX27-202ENST00000368841 DCAF17Q5H9S7 520 aaPredicted RBP20.65■□□□□ 0.9
SNX27-202ENST00000368841 LRPPRCP42704 1394 aaKnown RBP20.65■□□□□ 0.9
SNX27-202ENST00000368841 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
SNX27-202ENST00000368841 CHMP2AO43633 222 aa20.64■□□□□ 0.9
SNX27-202ENST00000368841 SPECC1LQ69YQ0 1117 aa20.64■□□□□ 0.9
SNX27-202ENST00000368841 IFT81Q8WYA0 676 aa20.64■□□□□ 0.9
SNX27-202ENST00000368841 CCDC114Q96M63 670 aa20.64■□□□□ 0.9
SNX27-202ENST00000368841 HDAC9Q9UKV0 1011 aa20.64■□□□□ 0.9
SNX27-202ENST00000368841 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.9
SNX27-202ENST00000368841 RAB3IL1Q8TBN0 382 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 ZNF408Q9H9D4 720 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 RMND1Q9NWS8 449 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 NDC80O14777 642 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 KANK3Q6NY19 840 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
SNX27-202ENST00000368841 TNNQ9UQP3 1299 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 KIF4AO95239 1232 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 UBXN1Q04323 297 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 SIRT1Q96EB6 747 aa20.64■□□□□ 0.89
SNX27-202ENST00000368841 RSPH14Q9UHP6 348 aa20.63■□□□□ 0.89
SNX27-202ENST00000368841 CD109Q6YHK3 1445 aa20.63■□□□□ 0.89
SNX27-202ENST00000368841 LZTFL1Q9NQ48 299 aa20.63■□□□□ 0.89
SNX27-202ENST00000368841 MCM9Q9NXL9 1143 aa20.63■□□□□ 0.89
SNX27-202ENST00000368841 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
SNX27-202ENST00000368841 CKAP4Q07065 602 aaKnown RBP20.63■□□□□ 0.89
SNX27-202ENST00000368841 MAEAQ7L5Y9 396 aa20.63■□□□□ 0.89
SNX27-202ENST00000368841 PCF11O94913 1555 aaKnown RBP20.63■□□□□ 0.89
SNX27-202ENST00000368841 CCDC6Q16204 474 aa20.63■□□□□ 0.89
SNX27-202ENST00000368841 UQCRFS1P1P0C7P4 283 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 KRT5P13647 590 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 LMOD1P29536 600 aaPredicted RBP20.62■□□□□ 0.89
SNX27-202ENST00000368841 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms